Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1045 |
Symbol | |
ID | 4484053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1280843 |
End bp | 1281874 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639721793 |
Product | putative transposase |
Protein accession | YP_864969 |
Protein GI | 117924352 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0831423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGGGATC ATGACAGCAG CTATAAGCAG CTTTTCAGCC ATGCGGATAT GGTGCGTGAT CTGCTGTTGG GATTTGTAGA AGATGAGTGG GTAGAACAAC TGGATTTTGC CAGCCTTGAG AAGGTGAGCG GCAGCTATAT CACAGATGAT CTTCGTAATC GTGAGGACGA TGTAATCTGG CGTGTGCGCT GGGGTCATGA ATGGCTGTAC CTCTATCTAT TGATTGAGTT TCAATCAACC GTAGACTGGA TGATGGCGGT TAGGATGAAC GCCTATGTGA TGCTGCTGTA CCAAGATTTG GTGAAATCTG GTCAGGTAAA ACGAGGGGCA TTGTTACCAC CGGTCTTACC GATGGTGCTT TATAACGGCA AAAAAAACTG GACAGCGGCT ATTGATGTCA GTGATATGGT GGCTTCTGTC CCGGCTGGCC TAGAGCGGTT CCGGCCTCAT ATGCGCTACT TGCTTATTGA TGAAGTGAGA TATGAGGATG CTACCCTAGC TGAAATGAAG AATCTTGTTG CAGCCCTGTT CCGCCTGGAA AAAAGTCAAT CGCCGACGGA TATAAGGGCG GTTTTAAAAA GTCTGATTGA ATGGTTAAAG GCCCCTGAAC AATTAAGCCT AAGGCGGGCT TTTACCGTGA TGCTAGGCAG GGTACTGTTG CCCAGAAAGG TGCCGGGCCA GACAATACCA GAGTTAAACA ATTTGCAGGA GGTTGATGCG ATGCTCGCCG AGACTGTGCT GGAATGGACC AAAGAGTGGC AAGCTCAAGG TATGCAAAAA GGGCTTCAAG AGGGACGTCA AGAGGGACGT CAAGAGGGAC GTCAAGAGGG ACGTCAAGAA GGGCTTCAAG AAGGGCTTCA AAAGGGGCGT CAGGAAGAGG CGGCATCCAT GCTGCTCCGA CTTTTGTCAC GCCGTTTTGG TCCATTACCC GAAGGGATTT CTGCTAAAGT CATGACGGCA AAGGTGGAAG AGATCGAGAA CTGGGGAGAT AACATTTTCG ATGCAAAAAC GTTGGGTGAC GTGTTTGAAT AA
|
Protein sequence | MGDHDSSYKQ LFSHADMVRD LLLGFVEDEW VEQLDFASLE KVSGSYITDD LRNREDDVIW RVRWGHEWLY LYLLIEFQST VDWMMAVRMN AYVMLLYQDL VKSGQVKRGA LLPPVLPMVL YNGKKNWTAA IDVSDMVASV PAGLERFRPH MRYLLIDEVR YEDATLAEMK NLVAALFRLE KSQSPTDIRA VLKSLIEWLK APEQLSLRRA FTVMLGRVLL PRKVPGQTIP ELNNLQEVDA MLAETVLEWT KEWQAQGMQK GLQEGRQEGR QEGRQEGRQE GLQEGLQKGR QEEAASMLLR LLSRRFGPLP EGISAKVMTA KVEEIENWGD NIFDAKTLGD VFE
|
| |