| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1042 |
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| Symbol | |
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| ID | 4484050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1275614 |
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| End bp | 1277443 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721790 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_864966 |
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| Protein GI | 117924349 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.972047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.384314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGC AACTGTTAAT CTACCTGTTT GTTGGCCTGT CGTTTGCTCT GTATATCGGC
ATTGCGATTT GGTCTAAAGC CAGCTCCACC GGTGAGTTTT ATGTCGCGGG TGGTGGTGTT
CATCCCATCG CCAACGGCAT GGCCACTGCG GCGGACTGGA TGAGCGCGGC CTCCTTCATC
TCCATGGCGG GCTTGATCGC CTTTATGGGC TATGAAGGGG GTATGTACCT TATGGGTTGG
ACCGGCGGCT ATGTGCTGTT GGCCCTGCTG CTGGCCCCCT ACCTGCGCAA GTTTGGTAAG
TTTACGGTGC CCGAGTTCAT TGGGGATCGT TACTACTCGT CAACCGCGCG GGTGGTGGCG
GTGATCTGCC TTATCTTTAT CTCCTTTACC TACGTGGCCG GCCAGATGCG CGGCGTGGGT
ATTGTCTTCT CCCGCTTTTT GGAGATGGAC ATTTTCTGGG GCATGGTGGT GGGTATGGGG
ATCGTCTTCT CCTACGCCGT GTTGGGGGGG ATGAAGGGTG TTACCTACAC CCAGGTAGCT
CAGTATTGTG TGTTGATTGT GGCTTACACG GTACCGGCGG TGTTTATTGC CATCCAGTTC
ACCGGCAATC CTCTGCCGCA GATCGCTTTG GGTTCCGAGA TGCTGGACGG TTCTGGCTAT
CTGCTGCAAA CCTTGGACAA GGTTTTGGTG GATATCGGTA TTTCTAGTTA TACCGAACCC
TTTAACAGCA AAGAGCGCAT TGACGTGTTT GCCATCACCC TGGCGTTGAT GGTGGGTACG
GCGGGTCTGC CCCACGTGAT TGTGCGCTTC TTCACCGTGC CTAAAGTGCG GGATGCGCGT
AAATCAGCCG GTTGGGCCTT GATCTTTATT GCCCTGCTCT ACACCACCGC GCCTGCGGTG
GGTGCCCTCT CCATGATGAA CCTGGTTAAC ACCGTTAATG GTAAAGATGG CACAGGCACC
AAATATACCG AAATGCCCAA CTGGTTTAAA ACCTGGGAGA CCTCGGGTCT GATCGCTTGG
TATGACCACA ATGGCGACGG TAAATTGCAG TATGCGGGTG GTAATGCCCT GGCTGGCAAG
CCTGCCTTTA GTGACACCGC ACGGGGTGCC CATGGTGAGC GTGTGGTCAC CAACCCCAAT
CCCAAGCCTG TTCAAAAGGG CACCAAAAAT TTCGCCAACG AGATCTATGT TGACCGCGAC
ATTATGGTGC TGGCTAACCC AGAAATTGCG CAACTGCCCA ACTGGGTCAT CGCTTTGGTG
GCAGCCGGTG GTATTGCTGC GGCACTCTCC ACCGCTGCGG GTCTGTTACT GGTGATTTCG
GCCAGTATCT CCCATGACTT GCTCAAGGGT ACCTTTGCAC CGGGTATCTC CGAGAAAAAC
GAACTATTGG CAGGTCGTAT TGCCGCTGCG GTGGCGGTGT TGGTGGCTGG TTATTTGGGC
TACCATCCTC CTGCTTTCGT GGCGCAGGTG GTGGCCTTTG CCTTCGGTTT GGCGGCATCA
TCCCTGTTCC CGGTCATCAT TATGGGTATC TTTAGCACCC GTATGAACCG TGAAGGGGCG
ATTGCGGGTA TGTTGGTGGG CCTGATGTTT ACCATGGGCT ACATCATCTA CTTCAAGGGC
ATCTTCATTG ATCCCATCGC CATTGCCAAC ACCAAAGAGT ATTGGTTGTT TGGTATCTCT
CCTGAGGGAA TTGGCTCTGT GGGTATGTTG CTGAACTTTG CAACCGCCTT CACCATCTCC
CGGATCACCA AGGCTCCGCC AGAGGCGATT CAACACATGG TCGAAGATAT CCGCATTCCT
AAGGGTGCGG GTTCGGCGAC CCATCACTAA
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| Protein sequence | MELQLLIYLF VGLSFALYIG IAIWSKASST GEFYVAGGGV HPIANGMATA ADWMSAASFI
SMAGLIAFMG YEGGMYLMGW TGGYVLLALL LAPYLRKFGK FTVPEFIGDR YYSSTARVVA
VICLIFISFT YVAGQMRGVG IVFSRFLEMD IFWGMVVGMG IVFSYAVLGG MKGVTYTQVA
QYCVLIVAYT VPAVFIAIQF TGNPLPQIAL GSEMLDGSGY LLQTLDKVLV DIGISSYTEP
FNSKERIDVF AITLALMVGT AGLPHVIVRF FTVPKVRDAR KSAGWALIFI ALLYTTAPAV
GALSMMNLVN TVNGKDGTGT KYTEMPNWFK TWETSGLIAW YDHNGDGKLQ YAGGNALAGK
PAFSDTARGA HGERVVTNPN PKPVQKGTKN FANEIYVDRD IMVLANPEIA QLPNWVIALV
AAGGIAAALS TAAGLLLVIS ASISHDLLKG TFAPGISEKN ELLAGRIAAA VAVLVAGYLG
YHPPAFVAQV VAFAFGLAAS SLFPVIIMGI FSTRMNREGA IAGMLVGLMF TMGYIIYFKG
IFIDPIAIAN TKEYWLFGIS PEGIGSVGML LNFATAFTIS RITKAPPEAI QHMVEDIRIP
KGAGSATHH
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