Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1019 |
Symbol | |
ID | 4482340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1250201 |
End bp | 1251475 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639721767 |
Product | ABC-type branched-chain amino acid transport system, periplasmic component |
Protein accession | YP_864943 |
Protein GI | 117924326 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.18333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGC GGTTTAAACA TCTGCTGGGT GCGGGAGCCA TTGCGGCAAG TTTACTGGGG GCTGGTTTGG CCCAAGCGGC GGAGACCATT AAGGTTGGTG TGTTGCACTC GTTATCGGGG ACCATGGCGA TCAGTGAAAC CACGCTTAAA GACACGGTTT TAATGATGGT GGATGACCTG AACAAAAAGG GCGGTTTGTT GGGTAAAAAG GTTGAGGCGG TGGTGGTGGA TCCCGCTTCC AACTGGCCCT TGTTTGCGGA AAAAACCCGT GAGTTGATTG AAAAAGAGAA GGTGGACGTT ATCTTTGGTT GCTGGACCTC GGTAAGCCGC AAATCGGTTT TGCCGGTTAT TGAAGAGCTC AATGGTCTGC TCTTCTACCC GGTGCAGTAT GAGGGTGAAG AGAGCTCCCG CAATGTCTTC TATACCGGAG CGGCCCCCAA CCAGCAGGCG ATTCCTGCGG TGGATTATCT GCTCAGCGAA GAGGGCGGTG CCGCCAAGCG CATCGTGCTG CTGGGTACCG ACTATGTCTA CCCCCGCACC ACCAACAAAA TTTTACGCGC CTACCTGAAC AGCAAGGGTA TCTCCGACGC GGATATTATG GAGAACTACA CCCCCTTTGG TCACTCCGAC TGGCAAACCA TTGTGGGCGA TGTGAAAAAG TTCGCCTCGG CGGGTAAAAA GACCGCTGTG GTTTCCACCA TCAATGGCGA CGCCAACGTA CCCTTTTACA AAGAGCTGGC CAACCAGGGC ATCAAGGCGG AAGAGATCCC TGTGGTAGCC TTCTCGGTGG GTGAAGAGGA GCTCTCCGGT ATTGACGCCA AGCCCCTGGT TGGTCACTTG GCCGCCTGGA ACTACTTTAT GAGCGTGAAT AACGACACCA ATGCCGCCTT TATCAAAAAG TGGCACGCCT TTATTAAAGA CAGCAAGCGC GTCACCAATG ATCCCATGGA GGCCACCTAC ATTGGCTTTA ATATGTGGGT GCAAGCGGTG GAGCAGGCGG GTACCGCGAA TGTGGATGCG GTGCGTCAAG CCATGTATGG CCAAAAGGTG CCTAACCTCA CTGGCGGTAT GGCAGTAATG AACAGCAACC ACCACCTCTC CAAGCCGGTG CTGATCGGTG AAATTCAACC CGATGGTCAG TTTGAAACGG TTTGGAAAAC CGAAGGTACC GTGGTGGGTG ACGCATGGTC CGACTTTATT CCCCAGTCGG CCAAATTGAC CGCCGATTGG ACCTACCCCT GGGTTTGCGG TAACTGCGAA AAACCCAAAT ATTAA
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Protein sequence | MSMRFKHLLG AGAIAASLLG AGLAQAAETI KVGVLHSLSG TMAISETTLK DTVLMMVDDL NKKGGLLGKK VEAVVVDPAS NWPLFAEKTR ELIEKEKVDV IFGCWTSVSR KSVLPVIEEL NGLLFYPVQY EGEESSRNVF YTGAAPNQQA IPAVDYLLSE EGGAAKRIVL LGTDYVYPRT TNKILRAYLN SKGISDADIM ENYTPFGHSD WQTIVGDVKK FASAGKKTAV VSTINGDANV PFYKELANQG IKAEEIPVVA FSVGEEELSG IDAKPLVGHL AAWNYFMSVN NDTNAAFIKK WHAFIKDSKR VTNDPMEATY IGFNMWVQAV EQAGTANVDA VRQAMYGQKV PNLTGGMAVM NSNHHLSKPV LIGEIQPDGQ FETVWKTEGT VVGDAWSDFI PQSAKLTADW TYPWVCGNCE KPKY
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