| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1004 |
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| Symbol | |
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| ID | 4481169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1234896 |
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| End bp | 1236563 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721752 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_864928 |
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| Protein GI | 117924311 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.356957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCT CATTTGATGG TCAACATCTT CTTCACCATC TGGCCGATGG CATCATTATC
CATGAGCAGG ATATGATTCT CTACGCCAAT GAGATTGCCC GCATTATGCT GGGCACAGAG
ATCCACACGG ATCTAACTCA AAGCCTCTTT TCACTCCGCA TTGACCCCAC CTGCCGGGAA
GCTTGGTTAC ACAACGGGGC CAACCATAGC CACGAGGCCG ACAGGGTTAA ATTGGTCGAC
CTCAAACTGC TGCCCGAAGC CAAACCCTTT ACGCATGTCG AGGCATTGAC CATCCCCTTT
CAGGGTAATG AACGGCTGCT GGTCACCACG CTGCGGGATA TTAGCGAGAA AAAACGTCAA
GAAGAGCGTA TACGCCATCA AGCCAACTAT GATGCCCTTA CCGGCCTGCC TAACCGTGGC
CTGTTTTTAG ACCGTTTAAA GCTGGAGCTG GCACGGGCCA AACGTACCGA CGTGCGTGTC
GCGGTGATGT TTATTGACCT AGACCGCTTT AAGTGGGTCA ACGACACCCT GGGTCATGCG
GCGGGGGACG ATCTGCTGCG AGAGGCCTCC AAACGGCTGC TCTCTTGTCA TCGCCAATCG
GATACCGTGG CCCGCATGGG GGGGGATGAG TTTACGGTTA TCCTGCCCGA CATGGCCCGT
GGTCCCCATG CTGAGCGGGT GGCGGCGCAA ATTTTAGAGC AACTCGCCGC CCCTTTTACC
CTGGAGGGTC AGGAAGTTAC CATCTCAGGA TCGGTGGGTG TCACCATTTT TCCCGACGAT
GCGGACAACC TGGATGATCT GCTTAAAAAC GCCGATACTG CCATGTACCG GGCCAAGTCC
CAAGGCCGCA ACGCCTACCG TTTTTATACC CCCGACATGC ATGCCGAGGC GATGGCCCGT
ATGGCCCTGG AGCGGGAGCT TTCCAGTGCG GTAGAAGACC AAGAGTTGGC GCTCTGTTAT
CAACCGATTG TTGATCTTAA TACCAATCGA ATCGCCGGGG CTGAAGCCCT GTTGCGCTGG
AACCACCCCA CCTTAGGGGC GGTCTCGCCT GAGGTGTTTA TACCCATTGC CGAAGAGATG
GGGTTAATCG CACAGATTAC CGAATGGGCC GTGCGCGAGG CGTGTACCCA AGCCTGCCAA
TGGCGCAGCC AATATGGTAC GGCCAAAGAT TTTTTTATCT CGGTCAACCT AACCTGCACC
CGCTGCCGGG AGCTTTCCAC CGACGACAAA ATCCCCTCTA TCCTGGCCGA GACCCAACTG
CCCCCCCACG CGCTGGTGCT TGAGGTAACC GAGACCATTT TGGGCGAAGA CCCCCCCAAA
GCGATGGCAA TGCTTAACCA CCTGAAACAG ATCGGTGTGC GCTTATGGCT GGACGACTTT
GGCACCGGCT CATCCTCATT AAGCGTGTTG CGCAATCTGC CGGTTTGTGG GGTTAAAATT
GACCGTACCT TTGTACCCGA TGCCCTTAAT GATAAAGAGG CCGAGGTGCT GGTCACCACC
ATCATCAACA TGGGCCGCAG CCTTAACCGC ATTTTGATTG GTGAAGGGGT GGAAACCGAA
GCCCAACGCC TCTATCTAGA GGGCAAAGGG GTGCAACTGG CCCAGGGCTA TTTTTTTGGT
AAGCCCTGTT CTGCCGCCGA ATTTCCCGAT CAATTTTTTG ACCACTGA
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| Protein sequence | MDFSFDGQHL LHHLADGIII HEQDMILYAN EIARIMLGTE IHTDLTQSLF SLRIDPTCRE
AWLHNGANHS HEADRVKLVD LKLLPEAKPF THVEALTIPF QGNERLLVTT LRDISEKKRQ
EERIRHQANY DALTGLPNRG LFLDRLKLEL ARAKRTDVRV AVMFIDLDRF KWVNDTLGHA
AGDDLLREAS KRLLSCHRQS DTVARMGGDE FTVILPDMAR GPHAERVAAQ ILEQLAAPFT
LEGQEVTISG SVGVTIFPDD ADNLDDLLKN ADTAMYRAKS QGRNAYRFYT PDMHAEAMAR
MALERELSSA VEDQELALCY QPIVDLNTNR IAGAEALLRW NHPTLGAVSP EVFIPIAEEM
GLIAQITEWA VREACTQACQ WRSQYGTAKD FFISVNLTCT RCRELSTDDK IPSILAETQL
PPHALVLEVT ETILGEDPPK AMAMLNHLKQ IGVRLWLDDF GTGSSSLSVL RNLPVCGVKI
DRTFVPDALN DKEAEVLVTT IINMGRSLNR ILIGEGVETE AQRLYLEGKG VQLAQGYFFG
KPCSAAEFPD QFFDH
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