| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0979 |
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| Symbol | |
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| ID | 4482972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1201285 |
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| End bp | 1202412 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639721727 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_864903 |
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| Protein GI | 117924286 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.2318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCTATG CCGGTGGCGA GGTTACGGCC AAACGCTACA AACAAAACAC CCTGGATCAT
GATGGCTATA AAATTGATGG TTATGCTTTG CAGGTGGAGG TGCCCATCAT CCACTACAGC
CACTATAAGG GTTACCAGCA GGCCAAAAAA AATGTGGAGC GGCTAACCCT CAGCCGCGAA
GATACCGCCA TGCAGCTCGC TTATGATGTG GCAACAGCCT ATTTCCAGGT GCTGCTGGCG
CAACAAGATC TGGAAGTCGC CCAGGCAGAA AATTTGGCCG TTACTCGCCT GCTGGAACGT
GCCCAGGCCG AGTTTAAGGT GGGCCGGATC ATTGTCACGG ATCTTGAAGA GGCTAGGGCA
CGGGTGGATC TCTCCAATGC CCAACTGCTG GCCCTGGCGG AAACCCGCGA ATCTCGACAA
GAGGCGCTGG TAGAGTTAAT CGGCAAGCAG GTTGCCAGCC TGGCGGACCT TGAGCAAAGC
TTTCCCCTCG ATAAGCCCGA ACAGGATGTC GCCTACTGGA TACAAAAGGC ATTGGTCCGT
AATCCCATGT TCCGGGTATT GGATGTCGCC GCCGAAGCGG CCCAGTTGGG GGCCGATAAG
GCACGGGGTG GTCTCTATCC CACCCTTTCT CTAAACGCCT CCCATAGCGT CTATAACAAT
ACCGCCTCTG CCACTTGGTT GGGGGCCGAT ACCAACACCC AGGTCTTGGG TGTGACCTTG
AGCGTGCCCC TCTTCCAAGG AGGGCGGCCA GAGGCACAAA TGCGCGAAGC GCTCTCGCAA
AAGGATGAGG CCCAGCTTAA ACGCGAGGAT CTGTACCGTA AAATTACCCG GCAAGTGGGG
GATAGCTACC GTGGCGTGTT GACCGCGATT GCACGGGTAA ACGCTCTCAA ACAGGCGGAA
AAATCGGCGC AAACCGCCTT AAAAACCACC CAAGCGGGGT TCACCGCCGG GGTGCGGACC
ATGTTGGATA TTCTCAATGC CGAGCGGGCC CTGCGCGATA CACAACGCCA TTTAAACGCA
GCCCGTATTG GCTATGTTCT GAATACATTA GCGCTACACC GCGCAGCGGG TGAGCTCAAC
GGTGAACTCA TGCAACGCAT TAACAGTTGG TTGCAAAAGG GTGTCTGA
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| Protein sequence | MPYAGGEVTA KRYKQNTLDH DGYKIDGYAL QVEVPIIHYS HYKGYQQAKK NVERLTLSRE
DTAMQLAYDV ATAYFQVLLA QQDLEVAQAE NLAVTRLLER AQAEFKVGRI IVTDLEEARA
RVDLSNAQLL ALAETRESRQ EALVELIGKQ VASLADLEQS FPLDKPEQDV AYWIQKALVR
NPMFRVLDVA AEAAQLGADK ARGGLYPTLS LNASHSVYNN TASATWLGAD TNTQVLGVTL
SVPLFQGGRP EAQMREALSQ KDEAQLKRED LYRKITRQVG DSYRGVLTAI ARVNALKQAE
KSAQTALKTT QAGFTAGVRT MLDILNAERA LRDTQRHLNA ARIGYVLNTL ALHRAAGELN
GELMQRINSW LQKGV
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