| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0953 |
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| Symbol | |
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| ID | 4482752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1170465 |
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| End bp | 1171541 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639721701 |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_864877 |
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| Protein GI | 117924260 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00228486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAAC CCCAACGTGT CGCCGTTGCC ATGTCCGGCG GTGTTGACTC CTCTGCCACC
GCCGCCCTAT TGGTGGAGCA GGGTTATGAA GTGATTGGGC TGACCATGCA GCTATGGGAT
CACAGCAGCC CCAAGGTGGC CGGTTCACGG AGCTGTTGCG CCCTGGATGA TCTCTACGAT
GCCCGACAAG TCGCCCAGAC CCTGGGCATA CCATACTATG TGGTTAATTA TGAAGCGGAT
TTTCGTCAAG CCGTGGTGGA CGATTTTATC CAAACCTACG CCGCTGGCCA GACCCCCAAT
CCCTGTGTGC GCTGCAATCA GATCCTTAAA TTTGATCTCT TGCTCAAAAA GGCGTTGGCG
CTGGGCGCTG ACTTTCTTGC TACGGGTCAC TATGCCATTC GCCGCGAGGA TGCTCAAGGC
GTTCCCCAAT TATGGCAGGG CAGCGACCCT GCCAAGGATC AATCCTATTT CCTGTTTACC
ACCACCATGG CCCAACTCGC CCATGTCCGT TTTCCGTTGG GGGAGATGGA CAAACAGCAG
ACCCGCCAAC TTGCCCAACG TTTTGGCCTA CACCTCTCCA CCAAACAGGA GTCGCAGGAT
GTCTGTTTTG TGCCCGATGG CGACTACAGC GCCTTTTTTG CCAAACAGGC TCCCCATCTC
TTGACCCCTG GTGCCATCGT CGATCAACAA GGCCACTCCC TGGGGCAACA CAAAGGCTTG
GGCTGTTACA CCGTGGGGCA GCGCAAAGGG TTGGGCATTG CCCACCCCAC CCCCTTGTAT
GTGCTCGCCT TGGACGCGCC CCACAACCAG GTGATTGTGG GCCCCGCCGA GGCCCTCTAT
CAGCAGCAGT TAACCCTGCA TCATGTCAAC TGGTTAGAGC CCACCCCCCC CACCGAGCCC
TTTGCCAGCA TGGCTAAAAT TCGCTATGCT GCACCACCGG TGGAAGCCCG TGTCGAGCCC
CTGCCCGATG GCGGCGCCCA GATCTACTTT AACCAACCCC AACGGGCCAT CACCCCAGGT
CAGGCCTGCG TTTTTTATGA CGGGGCACGG GTCGTGGGTG GCGGCTGGAT TGTGTGA
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| Protein sequence | MTQPQRVAVA MSGGVDSSAT AALLVEQGYE VIGLTMQLWD HSSPKVAGSR SCCALDDLYD
ARQVAQTLGI PYYVVNYEAD FRQAVVDDFI QTYAAGQTPN PCVRCNQILK FDLLLKKALA
LGADFLATGH YAIRREDAQG VPQLWQGSDP AKDQSYFLFT TTMAQLAHVR FPLGEMDKQQ
TRQLAQRFGL HLSTKQESQD VCFVPDGDYS AFFAKQAPHL LTPGAIVDQQ GHSLGQHKGL
GCYTVGQRKG LGIAHPTPLY VLALDAPHNQ VIVGPAEALY QQQLTLHHVN WLEPTPPTEP
FASMAKIRYA APPVEARVEP LPDGGAQIYF NQPQRAITPG QACVFYDGAR VVGGGWIV
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