| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0941 |
|---|
| Symbol | |
|---|
| ID | 4481593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1157925 |
|---|
| End bp | 1158680 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639721689 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_864865 |
|---|
| Protein GI | 117924248 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0158649 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTA CCATTTTGGG CAGCGGTACC GGTGTGCCGC TGCCAGAGCA TCAGCCCCCT
GGTTATTGGG TGCAGAGCCT AGGGTGCCAG CTCTTGATGG ATTGCGGCAG CGGTAGCGTT
TGGCGACTGA CGGCCCTGGG CGGGTCGTTG GTGACGCTGG ATGGTGTCGC CATCAGCCAT
ACCCATCCAG ACCATTGCGG CGATCTGCTG ACCCTGTTGC ATGCCTTGCA TCTGCCCGGT
ATGCAACGCG ATAAGCCTTT ATACCTCTTT GGCCCAACCG GATTTGCCGC CTTTTTGGAG
CAGTTTATTT TTCAACAGAC CAAAAAGCCC AAAGGCTTTG CGCTGGTCGT GCAGGAAAAT
CCCCAGGCTG TGCGCTTGGG TGACTTGAGC CTGAGCTCTG CCCCCATGCA GCACTCCACC
TCGACAGCAG CCATCGGCTA CCGGGTGACA AGCCAAGGAG GCACGCTGGT CTATTCTGGG
GATGCGGAGC CCTCTGCTGC GTTGATCGGC TTGAGTGACG CTGCGGATTT GGCCGTTTTT
GATTGTTCCA CCCTGGCCCA AGGGCAGGTG GCCGGGCACA TGAGCGCCTT GCAGTGCGGA
GAGGTGGCTC AGCAAGCGGG GGTGAAACGG CTCATTCTTT CCCATCTCTA CCCCCTTGCC
CAAGGGCGCC CCAACCGCGA CCGGCTGGCC GAGTGCCGTT TGGCCTATGC TGGGGAGGTG
GTGTTGGCCA GTGACCGGGC CCACTTTACA GTATAG
|
|---|
| Protein sequence | MRLTILGSGT GVPLPEHQPP GYWVQSLGCQ LLMDCGSGSV WRLTALGGSL VTLDGVAISH
THPDHCGDLL TLLHALHLPG MQRDKPLYLF GPTGFAAFLE QFIFQQTKKP KGFALVVQEN
PQAVRLGDLS LSSAPMQHST STAAIGYRVT SQGGTLVYSG DAEPSAALIG LSDAADLAVF
DCSTLAQGQV AGHMSALQCG EVAQQAGVKR LILSHLYPLA QGRPNRDRLA ECRLAYAGEV
VLASDRAHFT V
|
|---|
| |