| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0899 |
|---|
| Symbol | |
|---|
| ID | 4483297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1103348 |
|---|
| End bp | 1103851 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639721648 |
|---|
| Product | acetolactate synthase, small subunit |
|---|
| Protein accession | YP_864824 |
|---|
| Protein GI | 117924207 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
|---|
| TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATG TGCTTTCGGT GTTGGTGGAG AATGAAGCGG GTGTGTTGAC GCGGGTTTCC
GGCCTTTTTT CAGCCCGTGG TTTTAATATT GAGAGTCTCA CCGTGGCTCC GGTAGGGGAT
GGAGAGACCT CCCGCATTAC CCTTGTGACC ACGGGCGAGG ATAATATTAT TGAGCAGATC
ATCAAGCAGC TCCACAAGCT GGTGCCGGTT ATTCAGGTTC ACGACCTGAC CGACCGTTCC
CATGTGGAGC GGGAGTTGAT GATGGTTAAG GTCGATGCTG AGCGTGAAGT GCGTGCCGAA
GTGCTGCGCA TTGCCGATAT TTTTCGCTCC CGCGTGGTGG ATGCCACCCC CAACACCTTT
GTGGTTGAGG TGACGGGCAG CAGTGATAAG TTGGATGCCT GTCTTAACCT GCTCACCCCG
CTGGGGGTGG TGGAGGTGGT GCGTACCGGC AAGGTCGCCA TGGCGCGGGG TCCTAAACGT
ATGAAGGAAG TTCTCCCTGC ATAA
|
|---|
| Protein sequence | MKHVLSVLVE NEAGVLTRVS GLFSARGFNI ESLTVAPVGD GETSRITLVT TGEDNIIEQI
IKQLHKLVPV IQVHDLTDRS HVERELMMVK VDAEREVRAE VLRIADIFRS RVVDATPNTF
VVEVTGSSDK LDACLNLLTP LGVVEVVRTG KVAMARGPKR MKEVLPA
|
|---|
| |