| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0837 |
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| Symbol | |
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| ID | 4483417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1039983 |
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| End bp | 1040672 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639721585 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_864762 |
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| Protein GI | 117924145 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0423664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0981496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAAAA TTAGCAAACG CGCCACTGCG CATGGTGGAA AATTTGATCG TAGCGTCAAC
CATCCTTTGA GTGATGCGAT TAAGATCATC AAAGAGTGCG CCACCGCCAA GTTTGATGAA
ACCATTGAGG TTGCTGTCAA CCTTGGTGTG GATCCCCGTC ACGCAGACCA AATGGTGCGT
GGTAGTGTTA GCCTGCCTAA GGGCACCGGT AAAGTGGTTC GCGTCTTGGT GTTCGCCAAG
GGCGAAAAGG CCGAAGAGGC CAAAGCCGCG GGTGCAGATG TGGTGGGTGC CGATGATCTG
TTAGAAAAAA TTCAGGGTGG CTGGTTGGAG TTTGACCGCG TGGTCGCTAC CCCCGATGTG
ATGGGTGTGG TGGGGCGCTT GGGTAAAATT CTGGGTCCCC GTAACATGAT GCCCAACCCT
AAATTGGGTA CGGTGACCTT TGATGTTGCC AAGGTTGTAC AAGAGATCAA AGCGGGTCAG
GTGGCTTTTC GGGTAGAAAA AAGCGGTATT ATCCACGCAG GTGTGGGTAA AGCCTCTTTC
CCTGTTGAAG ATTTGGTTGA GAACATCACC GCTTTGGTGG AGCAACTGCG TCGTATGAAA
CCCGCAGCCG CTAAAGGGAC CTATATGAAA AAGGTGAGCA TCAGCTCGAC CATGGGTCCT
GGGATTAAGG TTGACCAAAG CAGCATCTAA
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| Protein sequence | MAKISKRATA HGGKFDRSVN HPLSDAIKII KECATAKFDE TIEVAVNLGV DPRHADQMVR
GSVSLPKGTG KVVRVLVFAK GEKAEEAKAA GADVVGADDL LEKIQGGWLE FDRVVATPDV
MGVVGRLGKI LGPRNMMPNP KLGTVTFDVA KVVQEIKAGQ VAFRVEKSGI IHAGVGKASF
PVEDLVENIT ALVEQLRRMK PAAAKGTYMK KVSISSTMGP GIKVDQSSI
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