| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0758 |
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| Symbol | |
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| ID | 4482350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 937307 |
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| End bp | 938794 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721502 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_864685 |
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| Protein GI | 117924068 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATA CTTTAAAAAG CTTAGCTGCA AATATTGATC AACTTACCGT GCTTGGCGAT
GGCGAAACCG TCATCACTCA ACTCTGTAAC GACTCCCGTT TATGTGAACC GGGCAGCCTG
TTTGCGGCCC TGCCCGGTAG CCGGGTGGAT GGCCGCGACT ACATCCCTCA AGCGCTAGAG
CTAGAGGCGG CAGCCATTTT ACATGATGGC AGTTTAAGCC TAGACCCCAA CACACCTCAG
CTCATTCATC CTGATCCACG GCGCGCCTTG GCCCATGTGG CGGCGGCCTT TTATGGTCAG
CCCCAGAAAA AGTTAAAATC CATCGTCATT ACCGGCACCA ACGGTAAAAG CACGGTGGCC
TCCATGTGTG CCACCATCCT GCGCCACAGT GGCCAGCGGG TTGGATTGAT CAGCACCGTT
GGTATTGATA TTGAGGGGCA AAAGCTGGCC ACCAGTCACA CCACCCCTGA TGCCATTACC
CTCTATGGTC TGTTGGCTGA CATGGTCCAA GCCAACTGTC GTTGGCTGGT CATGGAAGCC
TCCTCCCACG CCCTGGATCA ACATCGGCTG GTGGGTATTC AACCAGATGT CGCCCTATTT
ACCAACCTAA GCCGGGACCA TTTGGACTAC CACGGGGATA TGGGGGCCTA TTTCCAGGCC
AAAGCCAAAC TGTTCCGAGA ATACCATCCC AAATTGGCTC TGCTACCCAG CTCCGATGCC
CATGCCCAAG CGCTTAACTC TATCTGCCGT GAGCAAGGGG TGGCGGTACA GACTTACGGG
CGGGTGGCGC GTCAAGGGGT TTATGCCAAA CAGATTTCAG CCGCCATTGA TTGCACCCGC
TTTGTGTTAC AACAGAAAAA CCAATCGGCT CCGGTAACGC TTATGGCACC TGGCCGTTTT
AATCTGGACA ATGCCTTAGC TGCGGCCTCG GCCTGTCTTG GCATGGACTT GGATTTAGAA
ACCGTGGCCG AGGGGTTGAA TCGGTTTCAA TCGGTGGCGG GGCGGGTTCA AGCCATCCAT
GAGGGACAAA ACTTTGCGGT GCTGGTGGAT TTTGCCCATA CACCAGACGC GCTGGACCGA
TTGCTCTCAA GTCTGCGTCC CCTGACCCCG GGTAAGTTGT GGGTGGTGTT TGGCTGTGGG
GGCGATAAAG ATAGCGGCAA ACGGCCCCAT ATGGGGGAGT GCGCGGGCCG TTTGGCCCAC
TTTCCCATCA TTACCGATGA CAATCCCCGC AGTGAAGATC CTGCGGCCAT CCGCGCCCAG
ATTATGCGCG GCTGCCGCAA CCGCAACGCC CAAGAGATGG ACGACCGTGA GGATGCCATC
ACCTACGCCC TTGTGAACGC CCAGCCCGGG GATACCGTCG TGATCGCCGG CAAGGGACAT
GAGCAGAGTC AAATTGGCGC CCACGGTGCC ACCCCCTTTA GCGATGCGGA GGTCGCCCGC
CAAGCCCTGC GTGGACGCGC CGCCATGAGC CGGGATTTCT CTGCATGA
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| Protein sequence | MRHTLKSLAA NIDQLTVLGD GETVITQLCN DSRLCEPGSL FAALPGSRVD GRDYIPQALE
LEAAAILHDG SLSLDPNTPQ LIHPDPRRAL AHVAAAFYGQ PQKKLKSIVI TGTNGKSTVA
SMCATILRHS GQRVGLISTV GIDIEGQKLA TSHTTPDAIT LYGLLADMVQ ANCRWLVMEA
SSHALDQHRL VGIQPDVALF TNLSRDHLDY HGDMGAYFQA KAKLFREYHP KLALLPSSDA
HAQALNSICR EQGVAVQTYG RVARQGVYAK QISAAIDCTR FVLQQKNQSA PVTLMAPGRF
NLDNALAAAS ACLGMDLDLE TVAEGLNRFQ SVAGRVQAIH EGQNFAVLVD FAHTPDALDR
LLSSLRPLTP GKLWVVFGCG GDKDSGKRPH MGECAGRLAH FPIITDDNPR SEDPAAIRAQ
IMRGCRNRNA QEMDDREDAI TYALVNAQPG DTVVIAGKGH EQSQIGAHGA TPFSDAEVAR
QALRGRAAMS RDFSA
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