Gene Mmc1_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0744 
Symbol 
ID4480538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp919594 
End bp921864 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content56% 
IMG OID639721488 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_864671 
Protein GI117924054 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.857607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC GTCGTTGGAA AAACGCCGCC ACCCCATTAA GCCGTTGGAT GCTCCTGGTC 
CTGCTATTGG GGGTGGTCAT CACCTCGGTG GTGGTGGGTC GCGGCCTCTA CGGCAGTGCC
ACGGTGGATG GCGGAGGCGA CTATGGCGCG GTCTTTTTGA TCTTGCTGTA TGTCAATCTA
TTTTTGGTGT TGGCCTTGGG CTTTTTGGTC ATCCGCAACT TGGCCCGGCT GTGGTTAGAC
CGGCGGCGGC GGATGGCGGG CTCGCAGTTA CGTACCCGCA TGGTCACACT GTTTGTGGCG
CTCTCCCTGT TTCCGACGCT GGTTATTACC CTATTGTCGG TGGAGTTGCT GAACAAAGGG
GTGGATAGCT GGTTTTCGGA TCAAGTCTCC CAAGCTTTAG AAAAATCGCT GGAGGTCTCC
CGCGCACTCT ACCGTGAAAA TCAGCGCTCG GTTGGACATG ATGCCGAGGA TATGGTGCGT
AACCGCATTA TCAGCTCATC CTTTTCACTT CAGGGCAATG AGGCCAACAT GGCCGCCCTA
GAGATTGAAC GGCAAGCCCG CCAGTTGGAT GAAATTGCGC TGATTCATAG TGACGGCACC
CATATTTCTC GGGTTGGCGA ACTCCCCCAG GAGCCCACCC CCGATCTTAC CGTCATCGCC
CCCCGCTCCA CCCGTGCGCT CATGCATACC AACGACACCG GTAACATCGT ACGGGCCTAT
GTGCGGGTCG GGCCAGATCT GTTTTTGGTC ACGGGCCGCT ATATTGATGG TCAGGTGCTT
AACCATATGG AGACCATTGA GTCCACCTAT GTGGATTATA ATAAATTGGG GGCCTCCCAC
GGATTATTGA AAGGCAGCCA CACCATCACC CTCATTTTGA TCACCCTGCT GCTGGTATTG
GCGGCGGTGT GGTCAGGCTT TCGCATCTCC GAAACCATCA CCGAGCCCAT TACCGCCTTG
GTGGTGGGAA CGCGACAGGT GGCCGATGGG GATCTTTCGG TCTCTCTCCA AGTAACGGGG
GATGATGAGT TAGCCACCCT TATGCGCTCG TTTAACGCCA TGACCCAACG CTTGGCAGAG
AACCAACAGG CTCTGCAAGC GAGTAATAAT CTGCTGGAAG ATCGTCGTCG TTTTATGGCG
GCGGTGGTCG GTAACATCAG CTCTGGGGTG ATTAGTGTGG ACCACCTTGG GCAGATCAGC
CTCATGAATC CAGCGGCGGG TTCTCTGCTA GGCATTGACC CCACCAACAG TGTGGGGCAC
CATTTTGAAA AGGTCATGCC TGAACCGGTG CTCGCCCCCC TTTCAAGCCT GCTGGAGACA
GCCCTCACCC TAGAGGCGGT AGGCAGCGAG AACGGCATGA GTGAGCTTTC GGTGCAGATT
ATGATGGATG TTTACAACAG GCCGCGTACC CTGCTGGCAC GGCTTACCCT GCCCGATGTC
GGCGGACCGG GTTTTATTGT CACCTTTGAC GATCTGACCT CCGTGGTACA CGCCCAGCGC
TCCCAAGCCT GGAGCGATGT TGCCCGGCGT ATTGCCCATG AGATCAAAAA TCCCCTCACC
CCTATTCAGC TGTGGGCACA GCGCATGCGC CGCCGCTACC TAAAACCGGA GCTGGCCGAT
GTCACCGATT GGAAGGTGTT GGACGAGGGA ACCCAATCCA TCATTCAGCA GGTGGATGAG
CTCAAGGTTT TGGTGGATGA GTTCTCCACC TTTGCCCGCT TGCCCCGCCC GGATATGAAA
AAGGACTTCC TCTCCGACAC CTTGCATGAG GTGTTGACCC TACACGATGC TGAGTTTAAA
GATCTGAGTA TCGAGGTGCA TCTGGATGAG AGCATTCCGC CCTTTCCTTT TGATCGAGCC
CAGATCAAAC AGGTGGTCAC CAACCTGCTC ACCAATGCGG TGGCGGCTAT GGAGGATGAT
CGGGCGCAAG AGATAAGCGC CGCGCCATCG GACACGCTTG TTATCCGTGC CTGTGTGGCA
GAAAATGGAC GCGGTGTCTA TGTGCAAGTC GAGGATAATG GACCGGGCAT TCCCGTTGGT
AGCCGTGATC GGGTATTTGA GCCCTATTTT ACCACCAAAC AAAAGGGCAC GGGCTTGGGG
TTGGCCATTG TCAAAAAAAT CATTGAGGAC CATGGCGGTC GCCTGTGGGT CAAAGAGGCT
CCCAATGGTG GCACCCTCAT GGAGTTTATG CTGCCCCTTG CGGGTCCTCG GCAGTTGCCG
ATTCCTGAAC ATGGCGGCCA AGAAGAGAGT GTGAACGCGA TACCATCATG A
 
Protein sequence
MSERRWKNAA TPLSRWMLLV LLLGVVITSV VVGRGLYGSA TVDGGGDYGA VFLILLYVNL 
FLVLALGFLV IRNLARLWLD RRRRMAGSQL RTRMVTLFVA LSLFPTLVIT LLSVELLNKG
VDSWFSDQVS QALEKSLEVS RALYRENQRS VGHDAEDMVR NRIISSSFSL QGNEANMAAL
EIERQARQLD EIALIHSDGT HISRVGELPQ EPTPDLTVIA PRSTRALMHT NDTGNIVRAY
VRVGPDLFLV TGRYIDGQVL NHMETIESTY VDYNKLGASH GLLKGSHTIT LILITLLLVL
AAVWSGFRIS ETITEPITAL VVGTRQVADG DLSVSLQVTG DDELATLMRS FNAMTQRLAE
NQQALQASNN LLEDRRRFMA AVVGNISSGV ISVDHLGQIS LMNPAAGSLL GIDPTNSVGH
HFEKVMPEPV LAPLSSLLET ALTLEAVGSE NGMSELSVQI MMDVYNRPRT LLARLTLPDV
GGPGFIVTFD DLTSVVHAQR SQAWSDVARR IAHEIKNPLT PIQLWAQRMR RRYLKPELAD
VTDWKVLDEG TQSIIQQVDE LKVLVDEFST FARLPRPDMK KDFLSDTLHE VLTLHDAEFK
DLSIEVHLDE SIPPFPFDRA QIKQVVTNLL TNAVAAMEDD RAQEISAAPS DTLVIRACVA
ENGRGVYVQV EDNGPGIPVG SRDRVFEPYF TTKQKGTGLG LAIVKKIIED HGGRLWVKEA
PNGGTLMEFM LPLAGPRQLP IPEHGGQEES VNAIPS