Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0685 |
Symbol | |
ID | 4482424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 822260 |
End bp | 822928 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639721428 |
Product | electron transport complex, RnfABCDGE type, E subunit |
Protein accession | YP_864612 |
Protein GI | 117923995 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.360116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGA TAACCAATCG AGAGATTGTT GCCAATGGTT TTTGGAACAA CAATGCGGTT TTTGCGCAGT TACTGGGTAT GTGTCCGTTA TTGGGTGTGA CGACGACGGC GATGAACGGT ATTGGTATGG GATTAGCTTC ATTGGTGGTA TTATTGGGGG CCAATGTGGT GGTGGCGATG GTACGTAGTT ACATACCGTC GGAGGTACGC ATACCGAGTT ATATTGTGGT GATTGCGTCG TTTGTGACGA TTGTGGATTT ATGCATGAAT GCGTGGTTGC ATGATTTGCA CAAGATATTG GGTTTGTTTA TCCCGTTGAT TGTGGTGAAT TGTGCGATTT TGGGTCGTGC GGAGGCGTTT GCATCGCGCA ATTCGGTGGG GAAGTCGGCG ATTGATGGTA TAGCGACGGG TTTAGGGTTT ACGTTTGCGT TGTTTGTATT GGGTGCTGTG CGTGAGATTT TGGGTGCGGG TGAGATTTTT GGTTATGATG TGATGTCATG GTCTGGTTTT CATCCTGCAT TGGGGTTTGT GTTACCGCCG GGAGCGTTCA TTGCGTTGGG CTTTATTTTG ATGGGCGTTA AGTGGTTGAA CGAGCGTCGT GAGTTGGCTG CTGCGAAGAA GCCCAAGCAG AAGCGGGCGT CTGGTGAGGC GGTTGGGGTT GTGGCATAG
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Protein sequence | MSEITNREIV ANGFWNNNAV FAQLLGMCPL LGVTTTAMNG IGMGLASLVV LLGANVVVAM VRSYIPSEVR IPSYIVVIAS FVTIVDLCMN AWLHDLHKIL GLFIPLIVVN CAILGRAEAF ASRNSVGKSA IDGIATGLGF TFALFVLGAV REILGAGEIF GYDVMSWSGF HPALGFVLPP GAFIALGFIL MGVKWLNERR ELAAAKKPKQ KRASGEAVGV VA
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