| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0653 |
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| Symbol | |
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| ID | 4482916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 786252 |
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| End bp | 787505 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639721396 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_864580 |
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| Protein GI | 117923963 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.008692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGA CAAAGGCTTT TGATATACCG AAAGAGTTAG TGTGGCAGGC CTATCTGGAT
GTGAAACGAA GTTCAGGAGG GCCTGGCCTT GATGGTCTAA CGATGGAGGC ATTTGAAGAA
GATTTGAAGA ATCAGCTGTA TAGGTTATGG AACCGAATGT CGTCGGGCAG CTACTTTCCA
CCACCTGTCA TGCGGGTAGA AATCCCCAAA TCAGATGGTG GTGTGCGAGG GCTGGGTATT
CCGACGATTG GTGATCGTAT CGCGCAAGCG GTTGTGAAAC GATATCTGGA GCCATTGGTG
GAGCCAAAAT TCCATGAAGA CTCCTATGGA TATCGTCCCA ATCGCTCAGC TTTGGATGCC
GTTAGACAGG CCCGCCAGCG CTGTTGGCGG GATGACTGGG TGCTTGATCT GGATATCAGC
AAGTTTTTCG ATAAACTGGA TCATGCATTG GTAATGCGTG CGGTGAAGCG GTTTACAGAT
TGTAAGTGGG TTCTGCTCTA CATCGAGAGG TGGTTAAAAG CAGATGTTCA ACTACAGGAT
GAGACCATCC TTCATCGGGA GATGGGAACC CCCCAGGGCG GTGTAATCAG CCCTCTGCTT
GCAAACATTT TTCTGCATCT TGGTTTCGAT CAGTGGATGA AGGAGAATTA TCCTCACATT
CATTTTGAGC GTTATGCCGA TGATATTGTC GTGCATTGCC GTTCCTTGAA GCAGTTGCAG
TGGATCAAGA AGAGGATTGA ACAGCGCTTG AAGCTCTGCA AATTGTCTCT CAACGACAAA
AAGACGCGAG TTGTCTATTG TAAAGATTCT CGTAGGTCAG GGGAGTGGAC GTGTCAGAGC
TTTGATTTTC TGGGCTATAC CTTTCGTCCA AGGTCATCAC GCAACCACCG TGGAGAGCTT
TTTGTAAGCT TTAGTCCGGC AATCAGTCGG AAAGCTTCGA AATCTCTACG GCAGACCATT
CGGCGGGAGT GGAAGCTCCA AGCGAGGAGC CAGCACTCTA TTGAGGAACT GGCAAGACGT
TTAAATCCAG TGATCACAGG TTGGATAAAC TATTATGGCC GATTCTGTCG ATCGGAGATG
CACTCTGTAT TGGACCGGAT AAACACCGCT CTTGCCTTCT GGGCAATGCG TAAGTTCAAG
AAACTCCGTG GGCACAAGAC CCGAGCGCAC AAGTGGCTCA AAGGGGTTGC CCAGAGAGAG
CCATCTTTGT TTGCGCATTG GAAATATCAG GGCTGGATGA CAAGAGCCGT ATGA
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| Protein sequence | MNATKAFDIP KELVWQAYLD VKRSSGGPGL DGLTMEAFEE DLKNQLYRLW NRMSSGSYFP
PPVMRVEIPK SDGGVRGLGI PTIGDRIAQA VVKRYLEPLV EPKFHEDSYG YRPNRSALDA
VRQARQRCWR DDWVLDLDIS KFFDKLDHAL VMRAVKRFTD CKWVLLYIER WLKADVQLQD
ETILHREMGT PQGGVISPLL ANIFLHLGFD QWMKENYPHI HFERYADDIV VHCRSLKQLQ
WIKKRIEQRL KLCKLSLNDK KTRVVYCKDS RRSGEWTCQS FDFLGYTFRP RSSRNHRGEL
FVSFSPAISR KASKSLRQTI RREWKLQARS QHSIEELARR LNPVITGWIN YYGRFCRSEM
HSVLDRINTA LAFWAMRKFK KLRGHKTRAH KWLKGVAQRE PSLFAHWKYQ GWMTRAV
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