Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0618 |
Symbol | |
ID | 4484139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 748940 |
End bp | 749884 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639721361 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_864545 |
Protein GI | 117923928 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.237262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.917839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCAC AGCTTTCCAT CTTGGTTACT GGCGGTGCCG GTTATCTTGG CTCCATGCTG GTACCGGCCC TTCTTGAATT GGGGCACAAG GTTACGGTGG TTGATAACTT TATGTTCCAG CAGGACCCCC TGAATACCCT CTGTGTCAAC GATCATTTTT CTGTGGTGCG CGGGGATGTC CGCAACGAAG CCCTCATGCG TCCCTTGGTT GCCGCCGCCG ATGTGATCAT CCCACTGGCC GCGTTGGTCG GTGCACCGCT GTGCAGCCGC GATCAAGTGG GGGCTACCAC CACCAATAAA GATGCTGTCA TCACCATGCT GGCCTGGCTT AGCAAAGAGC AGCGCATTCT TATGCCCATC ACCAACTCCG GCTATGGCAT TGGTCAGCAG GATAAGTTTT GCACCGAAGA GAGCCCCCTG CGCCCCATTT CCCTCTATGG CCGAGATAAG GTTGAGGTGG AAGAGGCGAT TTTGAGCCAT GGCAACGCCA TCAGCTTTCG TCTTGCCACC GTGTTTGGCA TGGCCCCGCG CATGCGCCTG GATCTACTGG TCAATGATTT TGTCTATCGC GCCGTCCATG ATCGTGCCGT GGTACTGTTT GAGTCTCACT TTAAGCGCAA CTATATCCAT ATTCGCGATG TGGCCAAGGT CTTTATCCAC GGCCTGCACC ATTTTGAACA GATGAAAGAT AAGCCCTACA ACGTGGGACT ATCGGATGCC AACCTCTCTA AATATGAGTT GTGTGAGCGC ATACAGAAGC AGCTACCCAA TTTTGTGTTC ATGGAGGCCC CCATCGGCGA AGATCCCGAC AAGCGCGACT ACCTTGTCTC TAATGCCCGT ATTGAAGCGA CAGGGTGGTC CCCGGATTAC TCGCTGGATC AAGGCATTAA AGAGCTGATT AAGGGCTATA CCATGATACG CAATACCCGC TATACCAACG TCTAG
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Protein sequence | MHAQLSILVT GGAGYLGSML VPALLELGHK VTVVDNFMFQ QDPLNTLCVN DHFSVVRGDV RNEALMRPLV AAADVIIPLA ALVGAPLCSR DQVGATTTNK DAVITMLAWL SKEQRILMPI TNSGYGIGQQ DKFCTEESPL RPISLYGRDK VEVEEAILSH GNAISFRLAT VFGMAPRMRL DLLVNDFVYR AVHDRAVVLF ESHFKRNYIH IRDVAKVFIH GLHHFEQMKD KPYNVGLSDA NLSKYELCER IQKQLPNFVF MEAPIGEDPD KRDYLVSNAR IEATGWSPDY SLDQGIKELI KGYTMIRNTR YTNV
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