Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0583 |
Symbol | |
ID | 4481505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 705219 |
End bp | 706631 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639721326 |
Product | sugar transferase |
Protein accession | YP_864510 |
Protein GI | 117923893 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGCA TCTTTAAACA CTACATCTCC CGCTGGTCGT TACTGCTGGT GCTGTGTGAG ACGAGCGCCT TTTTGGCATC GGTCTACTTT GGTGTGGAGC TGCGTTTTTT TTGGGCGGCC GAGTTGGATG AGGTCCACCG TGCGGAGCTG TTGCCTAGGG CGCTCTTTTT TGCTGCGGTG ATGTTGATTA GCATGACCGC CACCGGGCGC TATCAGCGCT TGATGCGGCA GGGCATGACC GAAGAGGCGC TTAGTATTGG TTTGAGCTTT ATTATCGGCT TGGTGGCAAC CTCGGTGCTC TTTTATGCAC TGCCTGATCT GTTTATTGGC CGGGGGGCCT TTATCTACGC TTGGTTTATT GCACTGGGGT TGGTGCTGCT CATTCGCGTG GCTTTTTACC AATTTATTAT TGAACCCAGT GCATTACAGC GGCGCATTTT GATCTATGGT AGTGGTCAAA AGGCGGGCAT GGTGGAGCGC ATGATCGATC AAGACCCTGG TGATCGTGTG ATCGTCGGTT TTTGGAGCCC TCATAATAGC CCAAATGTGG TTGCTAACCA TTTGATCTAT AGTGATGAGC GCCTGTTGGT TTGGTGCCAG GAACACCATA TTTCCGAAGT GGTGGTGGCG GCAGACCATG GGGTTAGCAT GGAGGAGATG CAGCAGTTGC TTGATTGTAA GAGCAACCGC ATTTTGGTAT TGGATTTGCC GCAATTTTTT GAACGGGAAG AGCGGTTAAT CTTGATGGAG GCGTTGGGTA CCGAATGGTG GATTGCCCAC TCCGACGGCA TTGCCTCCAA TTTGGTGCAA GAGGTGATGA AGAAGAGTTT TGATATTTTG ATTAGCCTGC TGTTGCTGTT CACCCTGTGG CCGATCATGC TGGTGACGGC ACTGCTCATT GTTATAGAGG GGCGGGGCAA GGAGCCGGTT TTCTATCGGC AAGCTCGGGT CGGTTATGGG GGTAAAATTT TCCACGTGAT CAAATTTCGC AGCATGCGGG CCGATGCCGA GAAGGATGGT CCGGTGTGGG CGCAAAAAAA TGATAATCGT GTAACCCGTG TGGGGCGGGT GATCCGCAAT ACCCGCATTG ATGAGCTGCC CCAATTTATT AATGTGCTCA GGGGTGAAAT GAGTCTGGTG GGGCCACGCC CAGAACGCCC CGAGTTTGTG GAGCTGTTGC AACAGCAGAT CCCTTACTAC AGTGAGCGGC ATCGGGTTAA ACCGGGTATT ACGGGTTGGG CGCAGATAAA ATATGGGTAT GGTGCCTCGG TCGAGGATGC GGTGGAAAAG CTGAAATATG ATCTTTACTA CATTAAAAAT CACACCCTCT TTTTTGATTT GCTGGTGTTA ATCCACTCTG TTGAGGTGGT GTTGTTTGGC AAGGGGGCCG ATGCCCCACG CAAAGATGTT TGA
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Protein sequence | MIRIFKHYIS RWSLLLVLCE TSAFLASVYF GVELRFFWAA ELDEVHRAEL LPRALFFAAV MLISMTATGR YQRLMRQGMT EEALSIGLSF IIGLVATSVL FYALPDLFIG RGAFIYAWFI ALGLVLLIRV AFYQFIIEPS ALQRRILIYG SGQKAGMVER MIDQDPGDRV IVGFWSPHNS PNVVANHLIY SDERLLVWCQ EHHISEVVVA ADHGVSMEEM QQLLDCKSNR ILVLDLPQFF EREERLILME ALGTEWWIAH SDGIASNLVQ EVMKKSFDIL ISLLLLFTLW PIMLVTALLI VIEGRGKEPV FYRQARVGYG GKIFHVIKFR SMRADAEKDG PVWAQKNDNR VTRVGRVIRN TRIDELPQFI NVLRGEMSLV GPRPERPEFV ELLQQQIPYY SERHRVKPGI TGWAQIKYGY GASVEDAVEK LKYDLYYIKN HTLFFDLLVL IHSVEVVLFG KGADAPRKDV
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