Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0548 |
Symbol | |
ID | 4481452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 663044 |
End bp | 665212 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639721295 |
Product | ABC transporter related |
Protein accession | YP_864479 |
Protein GI | 117923862 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAA CCACCCCCCA ACAACCCCCA CATTGGACAC TGGAGGGGCA CGACCCACGC AGTGAAGACC CCCTTTTGGG CACCCTGTTG TTTCTGGCCC ACCATTGGCA CTTGCCCGCC ACGGTGCAGA GCCTAACAGC AAACCTACCC CTGACCGAAG CGGGCCTAAC CCCCGAACTT TTTTTGCGTG CTGCTGAACA GGCTGGCCTG AAGGCCCATA TTCGCAAACA GCCCTTACAC GCACTGCACA CGGAACACCT GCCCGCCGTG CTGCTCTTGC ATGGCCGTAT GGCTGTGGTA CTGCTGGGCT GGGATGAGGA TGAAGCCCAC CTGCTGCTGC CCGAAAGTGG CCGCGAAACC CGTCTGGATC GCCAAGCACT CGACGAGCGC TACGAAGGCC ACGCCATTCT GGTAAGCCCC ATGTTTAAAC ATGATGCCCG CACCAGCTTT ATTGGCAACC CAACCACGGG TCACTGGTTT TGGAGTGCGC TGTTCCGTTA CTGGCCTATC TACAGCGAAG TTGCCGTGGC CTCCTTACTT ATTAACCTCT TTACCGTGGC CTCCTCACTG TTTGTCATGA ACGTCTATGA CCGCGTGGTG CCCAACAAAG CCATGGAGAC CCTCTGGGTT TTGGCCCTTG GGGTAGCCAT TGTCTACTGC TTTGATTTTT TACTACGCAC CCTACGCGCC CATTTTTTGG ATACCGCTGG AAAACGGGTG GATATTGTAC TGGCCTCAAA CATCTACCGC CATGTTAGCG GCATGCAGTT AAGCTACCAG CCCCAAAGCA CCGGAGCCAT GGCGCGTAAT CTTCAAGAGT TTGAACCCCT GCGTGACTTT TTCACCTCGG CCACCCTTAC CGCCATTATC GACCTCCCTT TCACCCTGAT TTTTGTGGTG TTGGTCGCGC AACTGGGTGG CCTTAATGTC GCCATGGTCC CCCTGGTCTG CATGCCAGTG GTGATTCTGG TTGGGCTTCT GCTGCAAGCC CCCCTTAACC GGGTCATGAA TCGTGCCCTC AAAGAGTCTG CCCAGAAAAA CGCCATGCTG GTGGAAACCC TGGGCCGCCT AGAGACCATC AAACTTAATA ATGCCGAAGG ACACCTTGCC GGCAAGTGGG AAAATTGCAT CATCGAAACC GCTAAAACCG CCCAGCAGTC GCGTTTTCTC TCCACCCTGG GGGTGAATTT CGCCATGCTT GTGCAGCAGT TTAGCTCGGT GGCGGTGGTG GTGGTGGGGG TTTATGCCAT CAATGCCGGT GAGATCACCA TGGGGGCGCT CATCGCCTGT ACCATTCTGA CCGGGCGGGC CTTGGCCCCC CTCTCCCAGG TGGCAGGTTT GATGGTGCGC ATTCAACAAA CCATGATCTC CCTACGCACC CTCAATCAAA TCATGAACAC CCCCCAAGAG CGCCCCGAGG GACGCACCTT TCTTAGCCGC CCTCGCCTCT CGGGTAAGAT TCAACTCAAA GATCTTTCGT TCCAGTACCC CAATGCCAAA ACCGCCGCTT TGCAAAAGCT TAATCTACTC ATTGAACCCG GTGAAAAAGT CGGCTTTATC GGACGGGTTG GATCAGGCAA AAGCACTTTG CTTAAATTGC TGCAAGGACT CTACCCCCCC ACCGAAGGCC TGGTTTTGGT GGATGATATG GATGCCCGTC AAATCGACCC CGCCGACCTG CGCCGCAATA TGGGTTGTGT GACCCAAGAT GCCGGCCTAC TCTATGGTAC CATTCGTGAA AACATTACCT TGGGCGCCCC CTTTGCCGAT GATTCCACCC TACGCCGCGC GGTGGAACAG GGGGGTGTTG CGGCGTTTAC CGATCGCCAT CCCGATGGCT TGGATCTGGT TATCGGTGAG CAGGGCCAGG GCCTTTCGGG TGGGCAGCGG CAGTGCGTTT CCATCGCCCG TGCGTTGATC CATAACCCTC CCATTTTGCT GCTGGACGAA CCTACCAGCG CCATGGATAG CGGCTCGGAG GAGCGTTTTA AAAAGGTGAT TGAAGATACG TTACCTGGCA AAACCTTGCT GTTGGTAACC CATCGGGCCT CCTTACTCTC CTTGGTGGAT CGTGTTGTAA TCATTGAAGA TGGCCAAATT CTTGCCGATG GCCCTAAAGA GGCCATTTTA TGGCAACTTA AAGAAGGCAA ATTTAGGGTT AAAAGCTGA
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Protein sequence | MDQTTPQQPP HWTLEGHDPR SEDPLLGTLL FLAHHWHLPA TVQSLTANLP LTEAGLTPEL FLRAAEQAGL KAHIRKQPLH ALHTEHLPAV LLLHGRMAVV LLGWDEDEAH LLLPESGRET RLDRQALDER YEGHAILVSP MFKHDARTSF IGNPTTGHWF WSALFRYWPI YSEVAVASLL INLFTVASSL FVMNVYDRVV PNKAMETLWV LALGVAIVYC FDFLLRTLRA HFLDTAGKRV DIVLASNIYR HVSGMQLSYQ PQSTGAMARN LQEFEPLRDF FTSATLTAII DLPFTLIFVV LVAQLGGLNV AMVPLVCMPV VILVGLLLQA PLNRVMNRAL KESAQKNAML VETLGRLETI KLNNAEGHLA GKWENCIIET AKTAQQSRFL STLGVNFAML VQQFSSVAVV VVGVYAINAG EITMGALIAC TILTGRALAP LSQVAGLMVR IQQTMISLRT LNQIMNTPQE RPEGRTFLSR PRLSGKIQLK DLSFQYPNAK TAALQKLNLL IEPGEKVGFI GRVGSGKSTL LKLLQGLYPP TEGLVLVDDM DARQIDPADL RRNMGCVTQD AGLLYGTIRE NITLGAPFAD DSTLRRAVEQ GGVAAFTDRH PDGLDLVIGE QGQGLSGGQR QCVSIARALI HNPPILLLDE PTSAMDSGSE ERFKKVIEDT LPGKTLLLVT HRASLLSLVD RVVIIEDGQI LADGPKEAIL WQLKEGKFRV KS
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