Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0543 |
Symbol | |
ID | 4481447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 655233 |
End bp | 657599 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639721290 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_864474 |
Protein GI | 117923857 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTAATC TATCGCTATG GAAGTTCAAA ACACTGATTA GATTGCTTAT TTTAGTGCCT ACCTTAACTA TGCTCGGCAC AGGGTTGGTC ATATGGAGCG CCAGCAACAG CTCCCAGCAG CGAATTCACC ATGTGCAATC TCGTGTAGTG CCCCTCAACC AGCTTGCCCT TAGCATGAAG TATGAAGTGG CCCAGGTTAA CCTGTGGCTC ACCGATGTTT CCGCCACCCA AGCCCTCAAT GGTCTAGATG ATGGCTTTAA TGAAGCCGCC AACCATGCCA ATTTGTTTAA AAAACAGTTG CACGAGTTCC GTAAAGTCTC TGCGGCTGAA GGCAAAGACA AAAACTTTTT AGACCTCCTG GAGAGCCATT TTGACGCCTA CTACGCGCAA GCGCGGCAGA TGGCCCAAAG CTACGTCAGT GGCGGCCCTA CCGAAGGCAA CGCCTTAATG GGTGACGTGG ATGAAAAAGC CAAAGCGCTA GAAAATGACC TAATTATTCT AGAAAAGAAA TATGTGGCGG GCATGCTCAA GGCGTTGGAA ATCGTCGAGA CGCAAATGGG CCATTTGGTT ACCCGCTCCG TGCTGATTTT TATCGTTTCA ATCATCGTGA TCTTGGCCAT GGGAACCTTT GTTGCGCGCC TTGTGCTTGA TAAATTGGGG GCGGATCCCA TTGAATTGAG CCAAGTGATG GAACGCTTGG GCCGTGGGGA CCTCACCCAC CGGGTCATTT TCAAAAACGC CAAACCCCAC TCCTTGGCCC AGCATGTCAT GCAAATGTCC CGTGATTTGT TCCAAATGGC GGCCACCTTA AAACTGCAAG CCTTAACCAT GCGCGCCACC GTCTTGGAGC AGAAAGAGGC CCAGAATGAC CTAAAAAGAG ACTCCGGTGA GAGCTATGGA TTGGCTCAAG AGGTGGTCTC TATCAATGAT GGTATTGATG CCATGACCCA ATCCCTGCGG GTGGATTTGG AACAGGCCGA CAACAACATG GCAAGCCTTA CCGCCACGGC GGATGACCTT TCTGGTAGCG TCTCCTCGAT TGCCGCAGCC TCTGAACAGG CCAGTCAAAA TGTGAATACC ATGGCCGCCG CCGCCGAGCA GATGACCGGC AACATCACGG CGGTGAACAG CAGTCTCGAA CAGGTTAACC TTTCCGTTGG GCATGTTTCT GGTGCGCTGG ATGAGCTTAA CCACTCTCTG GATCAAGTGC GCAACCGCTG CATTCAGGCT GATCGCAAAT CCAATGAAGC CCAGCAATTT ACCCAACAGA CTCAGACCAC CATGGAGGCT TTAACCGAGT CAGCCCGTGA AATTGTTAAG GTAGTAGGGC TTATTAAGAC CATTGCCGAT CAAACCAATA TGCTGGCGCT GAACGCGTCC ATTGAGGCCG CCGGTGCTGG CGAGGCTGGC GCGGGCTTTG CGGTGGTTGC CAACGAGGTC AAGGATCTGG CCAAACAGAC TGCCGATGCC ACCAAACAGA TTGAACAGCG CACTCAAGAG ATCCAAAACA ACACCCAAGA GGCGGCCAAG GTTAGCTTTA ATGTCAATGA GATGATCCAA CAAATTGGCA AAACCACAGC CCAGATCACC GAAGCGGTGG AGGAGCAGTC CGGGGCAGTG GCCCGCATTA ATGACTCCAT GCATGATGTC ACCATTGCGG GGCAAGAGGT TGGGCGCAAC GCCATGGAGT TGGAAGCCGC CTCGACCGAG GTTGCCCGTG CCGCCTTAGA AGCCGCCGCA GGGACCAATG AAATCGCGGC CTCGGCTTCG CAGGTAGCGC GCAGCGCAGA ACAGGTGGCT CAGAACAGCA GTCAAGCATC GCAGCGGCTG AATGTGATTA AAAATAACTC GGGCGAGATC TATGAAGCAT CGGCCAACGT ACAGAAAAAA ATGTTGCAAT CCATGGATTT TGCCAACTTT TTGGATGGTG CCATTGCCCA TGCAGGTATG TTGAGTGAAA TGAGCGATGA GTCCTGTGAC GCCCTGAACA AAGCCGCAGA GGCCTTTAAT ATTGGCACGC CTGCCTTGGA TATCCAATCG GTTAAAAAGG CCCATATTGG GTGGCTGGGC AAACTGGTTG GGGTTATTCG CGGTCGTAGC AGCATTAAAC CAGAGGATGT GGCCACTGCC CGTGATTGTG CCTTTGGTCA ATGGTACTAT AATGAGGCCC AGTCAACCAT GGGGGATAAC CCCTTGTTTA TTGAGATTGC GACCCCCCAC CAAAAGGTAC ATGAAACCGC CCGTGAGGTG GTGAAACTGA TGAATGAGTT TAACCAGGAA GGGGCGGAAC AGGGATTGCA TCGCTTTAAT GAACTGCGCA AGGATCTCTT TAAACGCCTA GATCGGCTCT ACCTCGATAC CCTATAA
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Protein sequence | MFNLSLWKFK TLIRLLILVP TLTMLGTGLV IWSASNSSQQ RIHHVQSRVV PLNQLALSMK YEVAQVNLWL TDVSATQALN GLDDGFNEAA NHANLFKKQL HEFRKVSAAE GKDKNFLDLL ESHFDAYYAQ ARQMAQSYVS GGPTEGNALM GDVDEKAKAL ENDLIILEKK YVAGMLKALE IVETQMGHLV TRSVLIFIVS IIVILAMGTF VARLVLDKLG ADPIELSQVM ERLGRGDLTH RVIFKNAKPH SLAQHVMQMS RDLFQMAATL KLQALTMRAT VLEQKEAQND LKRDSGESYG LAQEVVSIND GIDAMTQSLR VDLEQADNNM ASLTATADDL SGSVSSIAAA SEQASQNVNT MAAAAEQMTG NITAVNSSLE QVNLSVGHVS GALDELNHSL DQVRNRCIQA DRKSNEAQQF TQQTQTTMEA LTESAREIVK VVGLIKTIAD QTNMLALNAS IEAAGAGEAG AGFAVVANEV KDLAKQTADA TKQIEQRTQE IQNNTQEAAK VSFNVNEMIQ QIGKTTAQIT EAVEEQSGAV ARINDSMHDV TIAGQEVGRN AMELEAASTE VARAALEAAA GTNEIAASAS QVARSAEQVA QNSSQASQRL NVIKNNSGEI YEASANVQKK MLQSMDFANF LDGAIAHAGM LSEMSDESCD ALNKAAEAFN IGTPALDIQS VKKAHIGWLG KLVGVIRGRS SIKPEDVATA RDCAFGQWYY NEAQSTMGDN PLFIEIATPH QKVHETAREV VKLMNEFNQE GAEQGLHRFN ELRKDLFKRL DRLYLDTL
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