| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0485 |
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| Symbol | |
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| ID | 4482397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 582858 |
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| End bp | 584951 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639721232 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_864416 |
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| Protein GI | 117923799 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGC GACACGCCGA AACATTGCTG CAAACCATGG TCGGCTCAGC AGAAGCCCAT
TTTCGCCCCG GTCAGTGGCA GGCGGTGGAT GCTCTGGTTA ATCAACAGCA ACGACTTATG
GTGGTACAAC GCACCGGCTG GGGCAAAAGC GCCGTCTATT TTGTCAGTAC CGCTATCCTA
CGCCAACGGG GGGCCGGCCC CACCCTGATC GTCTCGCCCT TGCTGGCCCT CATGCGTAAC
CAAGTCCAAG CGGCTGAGCG CCTAGGTATC CGCGCCATCT CCATCAACTC CGCCAATACC
GAAGCGTGGG ATGGCCTTCT AGACGACCTC CATGGCGACC GTGTCGATGC CCTGCTCATC
TCCCCCGAAC GCTTTAGCAA CCCCCAGTTT GCCGATACCG TGCTACCCCA CATGCTCGAC
CGCATCGGCC TGTTTGTGGT GGACGAGGCC CACTGCATCT CCGACTGGGG CCATGACTTT
CGCCCCGACT ACCGCATGCT GGTCCATATC ATCCAGCAGC TCCCCCCCAC CACCCCGGTG
CTGGGCACCA CCGCCACCGC CAATGATCGT GTGCTGGCCG ATATTCAGGC CCAATTAGGC
AACGTGCAGA TCCTGCGCGG CCCCCTTATG CGTGAAAGCC TGCTGCTGCA AAACCTACAT
CTACCCGACC AAATCAGCCG CTTAGCCTGG CTCGCTGAGC ATATCCCCCA CCTGCCCCAT
AGCGGCATTG TCTACGTGCT CACCAAACGC GATGCCGAAC AGGTCAGCCA GTGGCTTAAC
CGGAACCATA TCGCCGCCCT GCCCTACTAT AGCGGGGTGC AGGGCCATGG ATTTACCGAG
AGCAACAGCT ATCGACTCTA TCTGGAAGAT CAGTTAATCC ATAATAAAAT TAAGGTGCTG
GTGGCGACCT CAGCCTTGGG CATGGGCTAT GACAAGCCTG ACCTTGGCTT TGTCATCCAC
TATCAAGCCC CTGGATCCGT CATTAGTTAT TATCAGCAGG TGGGACGGGC GGGACGGGCG
CTGGAACAGG CCTATGGCAT TCTTTTTCAT GGTGCGGAGG ATGAGGCCAT CCATCACTAT
TTCCGCCAAC AGGCTTTCCC CTCGCCGCAG GAGGTGGAAA CCATTCTTGA GATGTTACAC
CAGCACGGTG CCACCACCAC CCGTGGGTTG ATGCGCCATG GCAATTTGGG TTGGGGGGCG
GTGGAGAAGG CCCTAAAATA TCTCAGCGTG CAAAAGCCTG CACCGGTAAC GCGTGAGGGC
AGCCAGTGGC AGTTAAGCGG CCACCCCTTT AACATGGACC ATGCCCACAT CGACTACCTG
ACGAGCCAGC GGGAACTGGA GTGGCAGGAG ATGCAACGCT ATGTACAGAG CCCAACCTGC
TTAATGCGCT TCTTACGCAA TGCCTTGGAT GATCCCGATG CCTCCAACTG CGGGCGCTGC
GCCGTCTGTC GTGGTCAAGC CATCGTGCCT ACCCGCTGGA GCGCCGCTCA AGCCGCTGCC
GCCCGTACGG TCATGCAATC CGACCCCATC ACCTGGGAAC CCAGAAAACA GACGGAAAAG
GGGGCCTTTG TCCTCACAAA GCTGGCCACC CACCTGCCCA AAGCGCAACA GGCCCAAGTG
GGCCGTGCCC TCTGCCGCTG GCAGCAGGCC GAGTGGGGCC AACTGGCCGC CCAAGGTTAT
AAAAAGGGCC ATTTTGCCGA AGCCTTGGTG CAGGCCATGG CCCACATGAT TCAACAGTGG
AACCCCCAAC CCGCCCCCAC TTGGGTGACG TGTGTACCCT CTAGCCGCAT GCCCACACGG
GTGCCGGATC TGGCCTTACG CTTGGCTCAG CAGCTCAAGC TACCCTTTGC CACCTGCGTC
AGCCAAAGCA GGCCCAACGC GCGTCAAAAA ACGATGCGCA ACAGCTTTTA CCAATGCCGC
AACCTCGATG GTGTGTTTGC CCTTGGCTCC ATCCCCCACA ACGGCCCGGT GCTGCTGGTG
GATGATTTTG TGGATAGCCG CTGGACCTTC ACGGTGGTGG CCGCCCTGCT GGCGCAAGGG
GGTGTTCCAC TCATCTACCC TACCGCCATG ATCAGCCTAG AGCAAACGCT TTAA
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| Protein sequence | MDKRHAETLL QTMVGSAEAH FRPGQWQAVD ALVNQQQRLM VVQRTGWGKS AVYFVSTAIL
RQRGAGPTLI VSPLLALMRN QVQAAERLGI RAISINSANT EAWDGLLDDL HGDRVDALLI
SPERFSNPQF ADTVLPHMLD RIGLFVVDEA HCISDWGHDF RPDYRMLVHI IQQLPPTTPV
LGTTATANDR VLADIQAQLG NVQILRGPLM RESLLLQNLH LPDQISRLAW LAEHIPHLPH
SGIVYVLTKR DAEQVSQWLN RNHIAALPYY SGVQGHGFTE SNSYRLYLED QLIHNKIKVL
VATSALGMGY DKPDLGFVIH YQAPGSVISY YQQVGRAGRA LEQAYGILFH GAEDEAIHHY
FRQQAFPSPQ EVETILEMLH QHGATTTRGL MRHGNLGWGA VEKALKYLSV QKPAPVTREG
SQWQLSGHPF NMDHAHIDYL TSQRELEWQE MQRYVQSPTC LMRFLRNALD DPDASNCGRC
AVCRGQAIVP TRWSAAQAAA ARTVMQSDPI TWEPRKQTEK GAFVLTKLAT HLPKAQQAQV
GRALCRWQQA EWGQLAAQGY KKGHFAEALV QAMAHMIQQW NPQPAPTWVT CVPSSRMPTR
VPDLALRLAQ QLKLPFATCV SQSRPNARQK TMRNSFYQCR NLDGVFALGS IPHNGPVLLV
DDFVDSRWTF TVVAALLAQG GVPLIYPTAM ISLEQTL
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