Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0464 |
Symbol | |
ID | 4481246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 563676 |
End bp | 564203 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639721211 |
Product | HPP family protein+B94 |
Protein accession | YP_864395 |
Protein GI | 117923778 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.938531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGTT ATCTTAAACG GTTGATCGCC CCTGCGACAC CAAACGCAAA AGTTGCCGAC ATGTTTTGGT CTTGGCTCGG TAGCTTTTTG GGTATTGGCT TGGTCGCTTG GCTCCATGAC CATCTGCTTA CCCAACAAGA TTTGGTTTTT ATCATCGGCT CCTTTGGGGC TTCCGCAGTG TTGATCTACG GCGCCATCAG CTCCCCCTTG GCGCAGCCCC GCAACCTGCT GGGTGGTCAC TTGATCTCGG CCTTGGTGGG GGTTGCTGTG TTCCAAACGA TGGGTAGCCT GCCTTGGTTG GCGGCGGCGT TGGCGGTCTC TTTGGCTATT GTCGCCATGC AGTTTACCCG CACCCTGCAC CCACCCGGTG GGGCCACCGC ACTGATTGCG GTTATCGGCT CGCAACGCAT TCACGACTTG GGTTACTGGT ATGCGCTGCT GCCTGCGCTG AGTGGGGCGA TTTGCCTGCT GGTGGTGGCG CTGCTGGTCA ACCATCTGGC ACCGGGTCGA AACTATCCCA CCACCTGA
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Protein sequence | MTGYLKRLIA PATPNAKVAD MFWSWLGSFL GIGLVAWLHD HLLTQQDLVF IIGSFGASAV LIYGAISSPL AQPRNLLGGH LISALVGVAV FQTMGSLPWL AAALAVSLAI VAMQFTRTLH PPGGATALIA VIGSQRIHDL GYWYALLPAL SGAICLLVVA LLVNHLAPGR NYPTT
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