| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0446 |
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| Symbol | |
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| ID | 4484009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 535561 |
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| End bp | 536559 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721193 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_864377 |
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| Protein GI | 117923760 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00410436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GCATTGGCAT CAACGGGTTC GGCAGAATTG GCAGAAGCAT CTTTCGCGCA
CAACGTATGG ACCCTGCGTT CAAAGATATT GAAATTGTTG CGTTGAATGA TCTTACCCCC
AAGCCTTCGT TGGCGCACTT GCTTAAGTAT GACTCGGTAA TGGGTGTATT GAATGCTGAA
GTAAGCGCCA CAGAGAAGGG TGTTTCTGTG GATGGCAAAG AGATCACTGT CTTTGAAGAG
CGTGATCCTG CCAAACTGCC TTGGGGCGAG TTAGGTGTTG ATTATGTGGT AGAATCCACA
GGTTTGTTCC GTAAGCGTGA GACTGCGGGT GCGCATCTTA AGGGTGGTGC CAAGCGGGTT
ATTATTTCGG CCCCTGCTGG TGGGGATATT CCTACCTTTG TGATGGGTGT TAACGAGAAC
GACTACAACC CTGCGACGGA TGACATTGTT TCCAACGCTT CGTGCACGAC CAACTGTTTG
GCCCCTATGG CGAAGGTTAT TGATGACAAG TTTGGTATTG AGCGTGGTTT GATGACCACG
GTGCATGCAT ACACCAACGA CCAAGCTTTG TTGGATCAGC CTCACAGTGA TTTGCGTCGT
GCTCGTGCGG CGGCGCTTTC GATGATTCCC ACCAAGACCG GTGCGGCGGC GGCCATTGGT
TTGGTTATGC CCAACATGAA GGGTCGTTTT GATGGTTTGG CGGTACGTGT GCCTACCCCT
AACGTATCTT TGGTGGATGC GGTGATGGAG GTTCGTGCTG AGACCACGGC TGAGGAGGTT
AATGCGGCTT TGAAGGCGGC GACCACCCGT TTCTTGGGTT ATTTTGATGC GCCTTTGGTC
TCCATTGACA TGCAGGGTGA TCCTCGTTCT TCCATTGTTG ATGGTGGTTG CACCCGGGTG
AATGGTAAGC AGATCAAGGT GATGAGCTGG TATGACAATG AGTGGGGTTA TTCCAACCGT
GTGTTGGATT TGATTCTGCA CATGGCCTCT AAGGCATAA
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| Protein sequence | MTIRIGINGF GRIGRSIFRA QRMDPAFKDI EIVALNDLTP KPSLAHLLKY DSVMGVLNAE
VSATEKGVSV DGKEITVFEE RDPAKLPWGE LGVDYVVEST GLFRKRETAG AHLKGGAKRV
IISAPAGGDI PTFVMGVNEN DYNPATDDIV SNASCTTNCL APMAKVIDDK FGIERGLMTT
VHAYTNDQAL LDQPHSDLRR ARAAALSMIP TKTGAAAAIG LVMPNMKGRF DGLAVRVPTP
NVSLVDAVME VRAETTAEEV NAALKAATTR FLGYFDAPLV SIDMQGDPRS SIVDGGCTRV
NGKQIKVMSW YDNEWGYSNR VLDLILHMAS KA
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