Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0368 |
Symbol | |
ID | 4482670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 422398 |
End bp | 424788 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639721116 |
Product | phenylalanyl-tRNA synthetase beta subunit |
Protein accession | YP_864300 |
Protein GI | 117923683 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA CCGAAAAATG GCTGCGTGAA CAAATTAATA CCCAGCTTGA TAGCGAACAG ATCAGCAAAA CCCTGACCAT GGCCGGCCTA GAAGTGGATG CCATGGAACG GCTGGGTAAA GGGTTGGATA AAGTGCAGGT AGGTTTTCTC GAAGCCGTGC AACCGCACCC CGACGCCGAC CGCCTAACCT GCTGTCAGGT GCGGGTGGGG GAAACACGGC TCAACATTGT CTGTGGGGCC ACCAACCATA AACAGGGCGA TAAAGTAGCC GTGGCCCGTG ATGGTGCCGA GCTGCCCAAT GGACTAAAAA TTAAAAAGGG CCAACTACGG GGCCAACCCT CCGAGGGCAT GCTCTGTTCC CTCACCGAAC TGGGCATGGC CGAAAGCTCG GAAGGGATTA TCATCCTGCC CAGCGATGCC CCCGAAGGGG CCACCATGGC CGACTATTTT CAACGTAACG ATATCTGCTT TGAACTGGGC ATTACCCCCA ACCGGGGCGA CTGCCTAGGG GTGCGTGGTA TCGCCAGGGA TTTGGCCGCC GTAACCGGCG AAAGCCTTAT CCCCCTGCAA AGCGCCGTTC AAGTGGCGGC CAACGTGCCC ACCGTCGCCG TTGAGATCGC AGACGGTGAA GGCTGTCCCC GCTACGCCGG ACGGGTGGTA GAAGGGGTCA AAGTAGGCCC CAGCCCCGAC TGGTTACGTA ACCGTTTGGA GTCAGTGGGA CTACGTAGCA TCAACAATAT CGTAGATATT ACCAACTATG TGATGCTGGA ACTCAACCAG CCCATGCACG CCTTTGATCT GGCTCAGCTC GCAGCCCCCA TCGTGGTGCG CCGCGCCAAC CCAGATGAGC GCCTGACAAC CCTGGATTAT GTCGAGCGGC AACTCACCGA GCAGATGACC CTGATCTGTG ATCAACAACG CCCGCTGGCC GTGGCCGGGG TGATGGGGGG GTTAAACTCC GGTGTGACCG ATGCAACCAC CAGCATCTTT TTAGAATCCG CCTATTTTAA TCCTGTGCGC ACCGCCCGCA CCGGTCGGCG GTTAAACCTT GTCACCGACT CACGTCACCG CTTTGAACGG GGTACCGACC CCATGGCGAT CGAGCTGGCA CTGGATCGCG CAACCCAACT GGTGTTGGAG CTGTGCGGCG GGCAAGCCGG GGCCATCACC CTGACCGATG CAGGCACCTG GAGCCGTAAT CCACCGGTGG CCTTTCGCCA TACCCGCGCC AATGCCCTGA CCGGTATGTG CTTGACCCAA GCGGAACAGG CCCGTTATCT CCAGGCTATC GGCTGTGTAG AGGTGGCAAA ACCCGCCCAG AGCGCCACTG TAGAAGGTGC CGTTTGGTAT CTACCCCCCA CCCACCGGCA TGATCTGCTG CGAGAAGAAG ATTTGGTGGA AGAGGTAGTG CGTCTGTTTG GTTATGACAA GGTGCCCACC GAGCTGCCCA GTGGCGCGGT GGCCACCCAC CAAGATAGCC CAGAGCGGCA ACTGGCAAAA CGGCTGCGCA AGGCCCTAAC CGGGCTGGGC TATCTGGAAG CGGTCAACTA CGCCTTTGTT GCCCCCGAGG TGCAAGCCCG CTTTGATGCC GATCTGCACC CCATTATGCT GACCAACCCT CTGTCGGAGG AGCAATCGTG CATGCGCACC TCGCTCATTG CTGGATTGGT TGAGGCGGTG CGGCGCAACC TAAGCCGGGG GAATGATGGT TTGCGCCTGT TCGAGATGGG ACACATCTTT AAACTGGATG CCCAAGGTCA GGTGCAGGAA GAAGAGCATG TGAGCATGGT GCTGGCCGGT CGCGGCACCC CACGTATCTG GCACACCCCC CAGCGGGTAT GGGATTTCTT TGACCTTAAA GGGGATTTTC AAACGGTGGT CAGTCGCCTG CAAGGGGCCG AACCCCGCTA TCTACCCGGT GGACCAGCCT TTTTACACCC TGGACGCAAA GCGGAGATCC ATCTACGGGG CCGGGTTGCA GGGTGGATGG GGGAGCTGCA CCCCTCCCTC AGAGAGGCCA TGGGCATAGA TCAACCGGTG CTCATGCTGG AACTGCGCAG TGATGCCCTA ACTCAGGTTA ACAAAAAAGA GGCGGCCAAT GTCAGCCGCT ACCCGGCGGT GACACGGGAT TTTGCCTTTG TGGTGGATCG TGACACCCCC GCAGCGACCA TTTTGGAGAG TGCCCGCAGT GTCGCCAAGC AGTTGGTGCG TGAGGTGGAG CTGTTTGATC TCTATACCGG CGAGCATGTG CCCCAGGATA AAAAGAGCAT CGCCTTTGGG CTGGTGCTGC AAGCCGATGA TCGTACGCTC GATGAGGGTG AGATCAATCA AGTTATGGCC CAGGTTACGG CCAAGTTGGA AAAACAGTTC AATGCCGTGC TGCGGGCCTA A
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Protein sequence | MKFTEKWLRE QINTQLDSEQ ISKTLTMAGL EVDAMERLGK GLDKVQVGFL EAVQPHPDAD RLTCCQVRVG ETRLNIVCGA TNHKQGDKVA VARDGAELPN GLKIKKGQLR GQPSEGMLCS LTELGMAESS EGIIILPSDA PEGATMADYF QRNDICFELG ITPNRGDCLG VRGIARDLAA VTGESLIPLQ SAVQVAANVP TVAVEIADGE GCPRYAGRVV EGVKVGPSPD WLRNRLESVG LRSINNIVDI TNYVMLELNQ PMHAFDLAQL AAPIVVRRAN PDERLTTLDY VERQLTEQMT LICDQQRPLA VAGVMGGLNS GVTDATTSIF LESAYFNPVR TARTGRRLNL VTDSRHRFER GTDPMAIELA LDRATQLVLE LCGGQAGAIT LTDAGTWSRN PPVAFRHTRA NALTGMCLTQ AEQARYLQAI GCVEVAKPAQ SATVEGAVWY LPPTHRHDLL REEDLVEEVV RLFGYDKVPT ELPSGAVATH QDSPERQLAK RLRKALTGLG YLEAVNYAFV APEVQARFDA DLHPIMLTNP LSEEQSCMRT SLIAGLVEAV RRNLSRGNDG LRLFEMGHIF KLDAQGQVQE EEHVSMVLAG RGTPRIWHTP QRVWDFFDLK GDFQTVVSRL QGAEPRYLPG GPAFLHPGRK AEIHLRGRVA GWMGELHPSL REAMGIDQPV LMLELRSDAL TQVNKKEAAN VSRYPAVTRD FAFVVDRDTP AATILESARS VAKQLVREVE LFDLYTGEHV PQDKKSIAFG LVLQADDRTL DEGEINQVMA QVTAKLEKQF NAVLRA
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