| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0358 |
|---|
| Symbol | |
|---|
| ID | 4481218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 410344 |
|---|
| End bp | 410880 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639721106 |
|---|
| Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_864290 |
|---|
| Protein GI | 117923673 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000855937 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCACGG TTAACGAACA CGATGAAAAT CGCCGGGATT TCCTGATCAT GGCAACAGGT
GCAGTGGGTG CCGTAGGTGT CGCTGGGGCA GCGTGGCCCT TTATTGACTC CTGGTCGCCC
TCTGCCGATG TGCTCTCACT CGCCACCACC GAAGTCAGTG TTGCTGCCAT CGCTGAAGGC
CAGATGATTA CCACCATGTG GCAGGGCAAG CCTGTTTTCA TTCTGCACCG CAACGCCGAG
CAGATTGAAA GAGCAAAAAC GGATGACAAG GCCACTGATC TGGTGGATCC GCAAGCAGAT
GCTGACCGGG TCAAGAAAGA TGAGTGGCTT ATTGTCCTGG CAATCTGCAC ACATTTAGGC
TGTGTACCCC AGCCTATTGG CACCGGTGAC TTTGGCGGTT TTCTCTGCCC TTGTCATGGC
TCGCATTACG ACACCTCTGG GCGTATCCGC AAAGGACCTG CCCCGCGTAA CTTGGAGGTG
CCCTACTACG AGTTCAAAGA TGACGAAACT GTCATCATTG GCAAGGCGAT GGGTTAA
|
|---|
| Protein sequence | MSTVNEHDEN RRDFLIMATG AVGAVGVAGA AWPFIDSWSP SADVLSLATT EVSVAAIAEG
QMITTMWQGK PVFILHRNAE QIERAKTDDK ATDLVDPQAD ADRVKKDEWL IVLAICTHLG
CVPQPIGTGD FGGFLCPCHG SHYDTSGRIR KGPAPRNLEV PYYEFKDDET VIIGKAMG
|
|---|
| |