| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0346 |
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| Symbol | |
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| ID | 4482876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 399227 |
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| End bp | 400585 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721094 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_864278 |
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| Protein GI | 117923661 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.344274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA AAATTCTGCT CGACGAGTCA GAGATGCCCA CCCAATGGTA TAATGTAACC
GCAGATATGC CTAACCGTCC GCCACCACCT TTAGGTCCTG ATGGCAAGCC GGTAACCCCT
GAAATGATGG GGATGATTTT TCCACCGGAT ATTCTGCAAC AGGAGATGTC TACCGAACGC
TGGATTGATA TCCCCGATGA AGTGCGCCAA ATTTTATCCC TGTGGCGCCC CTCCCCCCTC
TACCGAGCCC ATCGGTTGGA ACAGGCCTTA GCCACCCCTG CTAAAATTTA TTACAAGTAT
GAAGGGGTCA GCCCGGCGGG TTCCCATAAG CCCAATAGTG CCGTACCCCA GGCCTATTAT
AACAAAAAGG CCGGGATTAA ACGGTTAACC ACCGAGACCG GCGCCGGTCA GTGGGGCAGC
TCCATCGCCT TTGCGGGGCA GATGTTTGGC CTTGAGGTCG AGGTCTATAT GGTCAAGGTG
AGCTATCACC AAAAACCCTT CCGTCGCTCG ATGATGGAGA CTTGGGGCGC ACAGGTTTTT
GCCAGCCCCT CCGATCGTAC CGCGTCGGGG CGTAAAATTT TGGCTCAAGA TCCCGATAGC
CCAGGCTCGT TGGGCATCGC TATCTCAGAA GCCGTTGAGT TAGCCATGCA GGACCCCCAC
ACCAACTATT CGTTGGGTTC GGTTCTCAAC CATGTCTGCT TGCACCAAAC CATTATCGGC
CTAGAGGCCA AAAAGCAGTT CGCTAAGGCG GGTGATTACC CGGATGTGGT AATCGGTTGT
TGTGGTGGCG GCTCTAATTT TGCGGGCACA GCCTTTCCTT TCCTGGCCGA CAAAGCCGCG
GGTAAAGCGT TACGTCTACT GGCCATGGAA CCCAGCTCGT GCCCCACTCT GACCCGTGGT
CATTTTGCTT ATGACTATGG TGACGTGGCC GGTTTAACCC CCATGATGAT GCAGTATACC
CTGGGCCATG ACTTTACCCC GCCAGGTATT CATGCCGGTG GGTTACGCTA CCATGGGGAT
TCTAGCCAGC TCTCTCAACT GGTGCATGAC AAAATTATTG AGGCCCGTTC TGTCAACCAG
TTGGACACCT TCCGTGCGGG TGTTACCTTT GCTCAGGCCG AGGGCATTAT CCCTGCGCCC
GAATCCAACC ATGCCATTCG TGGCGCCATC GAAGAGGCTT TGCGCTGTAA AGAAGAGGGC
AAGCAAGAGA CCATCTTCTT TACCCTCTCC GGCCATGGCC ATTTTGACAT GACCTCCTAT
GACCGCTTTT TTGCCGGTGA ATTGGAGGAT TATCCCTACC CTCAAAGTGC CATCGAAGCG
GCACTTAAAC ATCTGCCCGA CCCAACCAAA ATGGGTTGA
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| Protein sequence | MQTKILLDES EMPTQWYNVT ADMPNRPPPP LGPDGKPVTP EMMGMIFPPD ILQQEMSTER
WIDIPDEVRQ ILSLWRPSPL YRAHRLEQAL ATPAKIYYKY EGVSPAGSHK PNSAVPQAYY
NKKAGIKRLT TETGAGQWGS SIAFAGQMFG LEVEVYMVKV SYHQKPFRRS MMETWGAQVF
ASPSDRTASG RKILAQDPDS PGSLGIAISE AVELAMQDPH TNYSLGSVLN HVCLHQTIIG
LEAKKQFAKA GDYPDVVIGC CGGGSNFAGT AFPFLADKAA GKALRLLAME PSSCPTLTRG
HFAYDYGDVA GLTPMMMQYT LGHDFTPPGI HAGGLRYHGD SSQLSQLVHD KIIEARSVNQ
LDTFRAGVTF AQAEGIIPAP ESNHAIRGAI EEALRCKEEG KQETIFFTLS GHGHFDMTSY
DRFFAGELED YPYPQSAIEA ALKHLPDPTK MG
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