Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0317 |
Symbol | |
ID | 4481734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 365328 |
End bp | 371249 |
Gene Length | 5922 bp |
Protein Length | 1973 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639721066 |
Product | superfamily I DNA/RNA helicase |
Protein accession | YP_864250 |
Protein GI | 117923633 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACTT TAATTTTACA TGTGTCGGTT CAAGAAAAAA TCAATTTTGC CACTCAACAA AATGCGGTCC CCATTTTACG TGAACTTAGC ATTGAAAATA TAGGCCAAGA GAGTGTAGCA AATTTACGTT TAACTTTAAC CAGCAATCCA GTCTTTCTCG TTCGAAAAAC ATGGCATCTG GATCAATTAG AACCGGGTTT GCGGTTGACA GTGAGTGACC GTGATATTCG TCTGGATGCA GGGCTTTTAA TGAGTCTCCA CGAGTCGCTA CGCGGGGATC TCAGAGTGGA GCTCTATCAA GACGATCTGC TACTAGTAGA GAAAAATATT GAAGTTGAAT TATTAGCACG CCATCAGTGG GGTGGTAGCC AATTTATGCC TGAAATGTTG GCAGCATTTA TTGAACCAAA TGATACGTTT ATTGCAGAAA TATTACGAAG TGCATCCAGC CTATTGCAAA AAAATGGCTT GGAGAGTGGT CTTGATGGTT ATCAGAAAGA TTCCTCCGTG CGGGTAGGTG AGGTTGTTTC GGCCATTTGG AGCGCCATCG CAGCCTTGGG TATCACTTAT GCGGAACCCC CAGCAAGCTT TGAACAGAAC GGTCAAAAAA TCCGTTTGCC TAGCATCATT AAGCAAACTG GATTAGCCAC GTGTTTGGAT CTCGCACTAT TGTTCGCTTC GGCCATGGAG CAAGCTGGGC TTAATAGTTT GATTATCATC ACGCAAGATC ATGCCTTTCC AGGAGTTTGG TTAAAACCTC AAACATTTCC AACGGTTCTA ATAAAAACTG CTTTAGACAT TCGGAAACGG TTTGACCTTC AAGAATTGTT GGTATTTGAA TCAACATTTG CCACAAGCCG AACCAACCCA GTACCATTCC ACAAGGCGGT AAAAAAGGGT AGAGCGCAGT TGGAAGAGCA TGGTCAGTTT TATATGGCTA TTGATGTGCA ACGTGCGCGG ATGTATCAAA TTCGCCCTCT CTATTGGGAG GATCAATGTG CAAGCAAAGA TCAGCTCAAT GTCGAGCAAG TCAGCAGCAT GGGCGTTGAT CTATTGGAAT TTTCAGATCA AGGGGTAATA CCAGAGCAGG AGTCGTTAAA ACCTACGACA GCTTCTGGAC GCTTGGAGCT GTGGCAGAAA AAACTACTGG ATCTATCACT GCGCAATAAA TTATTGAATT TTAAATTAAA TGGTTCCAGC GCTCTTGTGC TTATCTGTCC AGATCCAGGC TTGTTGGAAG ATAAGTTAGC GCAAAAGATG AAGTTGAGTA TAGAATCCCT ACCAGAGATG GGTTCATCCA ATAATGGGCG AGATGCCCAG TTGCACACAC AACGTACAGG TGGTGGTTTA ATTGAAGAGT TCGTTACTAA AGCGCTAGAA AAAAATCAGC TTTACGTACA AGAGGAGAAA GAGGCTCTCG ATAAAAGATT GACCTCTCTC TTTCGTCGAT CCAAGGCTGA CCTAGATGAA GGGGGCGCTA ATACGCTGTA TTTAGCCTTA GGATTTTTGA TCTGGTGGCG CAGCAATGAT CCAAACAAAA AATATTATGC TCCGTTGATT TTGATTCCTG TAACCCTAGA GCGCAAAAGT ATTCAGTCTG GGGTGCGCAT GGTGTTACAT GAAGATGAAC CCCGTTTTAA TACCACGCTT TTGCAGATGT TACGCCAAGA TTTTAGGTTA GAAATTCCAG GATTAGAGGG GGAGCTGCCC ACCGATACCC ACGGAGTGGA TGTGCATGGA ATTTGGCATA AAGTGCGGCA CCATGTACGA GACGTTGAGG GGTTTGAGGT GGTTGAGGAG GTTGCTCTAA GTAATTTTTC TTTTGCAAAA TATTTAATGT GGAAAGATTT AGTCGATCGT ACGGAACAAC TGAAAGAAAA TAGAGTTGTT CGCCACCTAT TGGAAACGCC TCAACAGAGC TATGCATCGG ACATTTCCTT TCGGGAGCCT CGTAATCTAG ATAATGAGGT AAAACCCCAG GATCTATTAA CCCCGCTACC CGCAGACTCT TCCCAGCAAA CGGCTGTTAT GGCCTCTGGT GAGGGGAAAG ATTTTATTGT CATAGGTCCA CCAGGGACTG GAAAATCACA AACCATTGCG AATATGATTG CGCACAATCT GGGACTAGGG CGTACGGTTT TATTTGTATC AGAAAAAGCG GCGGCATTGA ATGTGGTTTA CCGCCGTTTA AAAGAACAGG GCCTTGGAGA GTTTTGTCTA GAATTACACT CCAATAAAGC CCGTAAATTG GAGGTTCTTA ATCAGTTTGA TCAAGCATGG AGGTCTAAGA GCAGCTTTTC GCAGGTGGAG TGGCAAAGAG AGGCAAACCG ACTTAAAGAG ACTAGGGATG GCTTAAATCG TTATGTGCAG GCCATGCATC AGCCAAGCCG CCATGGCATG ACACCCTATC AAGCCATCGG AAAAATTGCA CTTGGGGACA CAGTTGTTCA GTTAGAGCTA AGCTTTGCCC ATGCCGATAT CCATGATCAC GCAGACTATG TAGCGCTGAC TGAGCTATGC CATAAAATGG ATCTATACAG TAAAGATCTG GGTAGCGTTG TTGCGCATGA ACTAGCCTTT GTCACCCATG ATGACTGGAC ACCACAATGG GTAAAAGATC TTTTGGCCAG CGCGCATTTG CTCAAAGAGC AGGCAGATAG GTTTCAGCAA TCCATAAAGG ATCTATATCT TCTCTTTGGT TACCCAGACC ACTCTATAAC AATATTGGAG CCCTTGTTAG CCTTGATTGG TACCATGCAA GATTTGTATG AACAGGATGC CAGTTTTTTG TTTGAACCCA ACACTACCCA AATTGTGCAG CAATTGGATG TGGGGATGCG TTGTGTTCAG GAGTTTACAG ACGAGCAAGA TCAATTGAGT TGTTGTTATC AGCTGGAGGG GCTGCTAGCA CTGGATATTG ATGCTTTGAC TAAGCAGTGG CAAGAATCAC AGCAGGCATG GTGGTTGCGG GGATGGTTTA TTAAACGTAG AGTGAACAAA GCCCTTAAAT ATATGGGGGG GGCAGTGGGT CAACCACAAC CTCATCGCGA TCTGCCACGC ATCAAACAAA TGAAGAAAAA GTACCAACAA TTACAAGAAT TAGACGCAGT AAACACTTGC GTACGCCATT GGCGAGGTTT GGAGAGTGAT TTAGCGGTGA TCCAAAGATT GGTAAAGGGC GGTCAACAGG TTAAGGCACG GATTCAGGAA ATTGCGCCAA CACCAACAGA ATTTGTGACG CTGCAAACCG TGGTACAAAG ATGGCTCATA GAGAGTAATA CCTTGTTGGC CCCCAATGGA ACATTACTGA CCTTATCAGC TAGGGTCAAA GAGCAACGCC AGCAATTGAT GGAAACATAC AACCGCGTGA TAAGTTTAAC GGGTGGTGAA GTTGATGAAT TTTTACCCCT TGGCGTTCTG TTTGGCCGAG CCCAAACCTA TGCAGCTACG CTGATTCAAA ACGAGTCGAA ACTTAACACA TGGTGCCGCT GGCAAGCTGT ACGTAAAGAG GCGTGTGCAC AAGGTTTACG GCCTCTGGTG GAGGCTATGG AAAAGGGGTT GTGTAAGACG GGCAAAGCCG AGCAGGTCTT TGAGATTAAC TATGCTCGGT GGTGGATTCA TCTTGTTTTT GCAAAGGAAC CAGATTTACG CCAATTTTCA GCAGTTGAGC ATGAGGATAA AATACGCATC TTCAGAATGT TGGATGAAAG ATTCAGTGAG CTAACACGAG AATATATCTG TGCCAAGCAG GGTGCGAATA TTCCAGACCA GAGTGGTGTT ACCCAAAGTT CGGAGTATGG GGTTTTAAAA CGTGAACTAC ACAAAAAAAT TCGCCACAAA CCCGTTAGGC AATTGTTTAG AGAGATTCCT AATGTCGTGA AGCAGTTGAC GCCCTGTTTA TTGATGAGTC CGCTTTCTAT TGCTCAATAT CTACCAACGG AAAAAGAGAA CTTTGATCTG GTTATTTTTG ATGAAGCATC GCAGATAACA GTATGGGATG CCATTGGATC ATTGGCTCGT GGCAAGCAAG TAGTCATTGC AGGAGATCCA AAACAGTTAC CTCCAACCAG CTTTTTTGGA CGACGTGAAG CGGAAGATGA GGGCGATGAC ACTGGGGACG TCACCGATTT AGAATCCATT CTGGATGAAA TGATGGGTTG TAGTATACCT CAGATACATC TTAACTGGCA TTATCGAAGC GCGCATGAAA GCCTTATAGC CTTTTCTAAC CAGCGCTACT ATATGAATAA ACTAATCACA TTTCCATCGG CTGTCACTGT TGACAGGGCA CTTAGATTGG TGACGGTAGA GGGTTACTAT GATCGGGGTG GCGCGCGGCA TAACCGTGCT GAAGCCGAAG CAATTGTTAC AGAGGTGGTC CGTCGCTTAA ATGATCCCAA TTTTGCCGGG GCGGGGAAAT CCATAGGTGT GGTGACGTTT AATAGTGAAC AGCAAAGATT AATTGAAGAC CTGTTGGATC GTGCACGTCG TGATGATCCA GCTTTAGAAC CCTATTTCGC GGATGAACAA TTAGAACCGG TGATTGTAAA AAATCTAGAA TCTGTACAAG GGGATGAGCG TGATTTAATC CTATTTAGTG TAACCTATGG CCCAGATCGA GCAGGTCATA TGACCATGAA TTTTGGCCCA CTGAACAAAC AGGGTGGAGA GCGGCGGTTA AATGTAGCCA TTACCCGTGC GCGTAGTGAA TTGATTGTAT TCTCAACTTT AAAACCTGAA CAAATGGATC TATCTCGAAC TCAGGCTAAT GGCGTTGTTG ATTTAAAAGA TTTTCTCAGA TACGCAGATC GTGGGAAAAT GGCTCTGGAT GAGGTATCGC ATGGATCTAT TGGTGGTTAT GATTCTCCGT TTGAGGAAGC AGTTTCCGAA GCATTAACCC GTAAAGGGTG GCGGGTCCAT TCACAGATAG GTGTTTCCGC CTTTAGAATA GATTTGGGGA TTGTGCATCC CCAAAGAGAG GGTCACTATT TTGTAGGTGT TGAGTGTGAT GGTGCAACCT ATCATAGTTC GGCTACTGCT AGAGACCGGG ACAAAGTACG AGAAGCCATT CTTGAACGTT TAGGCTGGCG TTTGGTGCGT GTTTGGTCCT TAGATTGGTG GGTAAACCCC AAAGATACGT TAGAAAAATT AGATCAGCGC ATCCAAGCTA TATTAGCAGA GGTGGATATA CAAATTGCGA GGGAAGAGGA GATCAGAAAA ACGGCGGAGG AAGCTTTTTA TCAAGCTAAG CAAGCCGCTA CGGCTGCCCT TTTTGAAGAG AATGGTGCAA AGCTCAAGGC TGAATCCGCT ACAATAGGCG AGCTTTCACA AACAAGTACT ACCGATGCCA AGGTGTTACA AGTCCGGTCC ATGCAGGCTG ATAAAGAAGA TCGTAGTTAC TATAGGATTG CCACTTTTGA GAAATTAAAT CTGAAACTTA ATCCTGATCT CTTTTATGAA TATAGTTACA CGCCAACGGT GCGCATGATG GTTGAGCATA TCCTTGAGAT TGAGTCACCT ATCCGCGAAG ACTTGCTCAT TAGACGTATC GCACAGGCTC ATGGGTTCAA ACGGTCAGGT CGGCTGATCG TTGAGCGCGT CATGCAGATC GTTGAAGAGA CAGCAGAAGT GACTCATGAA GAAGGGGTGG GTAATTTTCT GTGGAAACGA GGGGTAGATC TTTCTAGTTG GTCGGAGATT CGTTATCCGC AACAAGGTGA GCGTGAAGCA CGTAGACCAG ATGAAATAGC CATTCAAGAG CTAATGACCC TTGCTAAAGA GCACCAAGGA GAAGGGGCCT TGATCGATAC TATGGCCAGA AGTTTGGGGG TGTTTAGATT AAATGAGCGT AACAGGACAC GCTTACAGTT AGCCGCTCAA ATGGCTACTA AGTCAGCACC AGTAGAACCA GCAGTTCTCT AA
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Protein sequence | MDTLILHVSV QEKINFATQQ NAVPILRELS IENIGQESVA NLRLTLTSNP VFLVRKTWHL DQLEPGLRLT VSDRDIRLDA GLLMSLHESL RGDLRVELYQ DDLLLVEKNI EVELLARHQW GGSQFMPEML AAFIEPNDTF IAEILRSASS LLQKNGLESG LDGYQKDSSV RVGEVVSAIW SAIAALGITY AEPPASFEQN GQKIRLPSII KQTGLATCLD LALLFASAME QAGLNSLIII TQDHAFPGVW LKPQTFPTVL IKTALDIRKR FDLQELLVFE STFATSRTNP VPFHKAVKKG RAQLEEHGQF YMAIDVQRAR MYQIRPLYWE DQCASKDQLN VEQVSSMGVD LLEFSDQGVI PEQESLKPTT ASGRLELWQK KLLDLSLRNK LLNFKLNGSS ALVLICPDPG LLEDKLAQKM KLSIESLPEM GSSNNGRDAQ LHTQRTGGGL IEEFVTKALE KNQLYVQEEK EALDKRLTSL FRRSKADLDE GGANTLYLAL GFLIWWRSND PNKKYYAPLI LIPVTLERKS IQSGVRMVLH EDEPRFNTTL LQMLRQDFRL EIPGLEGELP TDTHGVDVHG IWHKVRHHVR DVEGFEVVEE VALSNFSFAK YLMWKDLVDR TEQLKENRVV RHLLETPQQS YASDISFREP RNLDNEVKPQ DLLTPLPADS SQQTAVMASG EGKDFIVIGP PGTGKSQTIA NMIAHNLGLG RTVLFVSEKA AALNVVYRRL KEQGLGEFCL ELHSNKARKL EVLNQFDQAW RSKSSFSQVE WQREANRLKE TRDGLNRYVQ AMHQPSRHGM TPYQAIGKIA LGDTVVQLEL SFAHADIHDH ADYVALTELC HKMDLYSKDL GSVVAHELAF VTHDDWTPQW VKDLLASAHL LKEQADRFQQ SIKDLYLLFG YPDHSITILE PLLALIGTMQ DLYEQDASFL FEPNTTQIVQ QLDVGMRCVQ EFTDEQDQLS CCYQLEGLLA LDIDALTKQW QESQQAWWLR GWFIKRRVNK ALKYMGGAVG QPQPHRDLPR IKQMKKKYQQ LQELDAVNTC VRHWRGLESD LAVIQRLVKG GQQVKARIQE IAPTPTEFVT LQTVVQRWLI ESNTLLAPNG TLLTLSARVK EQRQQLMETY NRVISLTGGE VDEFLPLGVL FGRAQTYAAT LIQNESKLNT WCRWQAVRKE ACAQGLRPLV EAMEKGLCKT GKAEQVFEIN YARWWIHLVF AKEPDLRQFS AVEHEDKIRI FRMLDERFSE LTREYICAKQ GANIPDQSGV TQSSEYGVLK RELHKKIRHK PVRQLFREIP NVVKQLTPCL LMSPLSIAQY LPTEKENFDL VIFDEASQIT VWDAIGSLAR GKQVVIAGDP KQLPPTSFFG RREAEDEGDD TGDVTDLESI LDEMMGCSIP QIHLNWHYRS AHESLIAFSN QRYYMNKLIT FPSAVTVDRA LRLVTVEGYY DRGGARHNRA EAEAIVTEVV RRLNDPNFAG AGKSIGVVTF NSEQQRLIED LLDRARRDDP ALEPYFADEQ LEPVIVKNLE SVQGDERDLI LFSVTYGPDR AGHMTMNFGP LNKQGGERRL NVAITRARSE LIVFSTLKPE QMDLSRTQAN GVVDLKDFLR YADRGKMALD EVSHGSIGGY DSPFEEAVSE ALTRKGWRVH SQIGVSAFRI DLGIVHPQRE GHYFVGVECD GATYHSSATA RDRDKVREAI LERLGWRLVR VWSLDWWVNP KDTLEKLDQR IQAILAEVDI QIAREEEIRK TAEEAFYQAK QAATAALFEE NGAKLKAESA TIGELSQTST TDAKVLQVRS MQADKEDRSY YRIATFEKLN LKLNPDLFYE YSYTPTVRMM VEHILEIESP IREDLLIRRI AQAHGFKRSG RLIVERVMQI VEETAEVTHE EGVGNFLWKR GVDLSSWSEI RYPQQGEREA RRPDEIAIQE LMTLAKEHQG EGALIDTMAR SLGVFRLNER NRTRLQLAAQ MATKSAPVEP AVL
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