| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0276 |
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| Symbol | |
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| ID | 4482329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 313530 |
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| End bp | 314450 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639721025 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_864209 |
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| Protein GI | 117923592 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0155473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCCA CCGCATCGGG CAAGACCGGA CTTGCCTTAC ATTTGGCCGA ACATTTTCCT
TTAGAGATCG TAAACGCTGA TTCGGTTCAG GTCTACCGGG GAATGGATAT TGGATCGGCC
AAGCCCACAT TGCAAGAGCG GCAGGCGATT GTGCACCATC TGATTGACGT CACCACGCCG
GATGATCCCT TTTCGGCGGG CCGTTTTCGC ACCGCAGCTT TGGAAGTGAT TGAGGATTGT
CACCGACGGG GGGTGATTCC GGCGTTGGTT GGGGGCACGG GATTTTATTT TCGCGCGGTG
GAGCAGGGCA TTGCGGAGAT TCCAGAGGTT GATGCCCAGA TTGTGGCTGA GTTAAACCGG
CGGGTGTGTG ACGAGGTGGG GTTGGCGTGC TGTTATGCCC AGTTACAGCA GGTGGATCCA
CCATGGGCGG CGCGGGTGGA GCCGGGGGAT CGGCAGCGTA TTGTGCGGGG GTTATCGGTC
TATCTTGCCA GCGGTCAGCC ATTGAGTTAT TGGCAGCAGC TTAGTTGCCA GCAGGCACCG
GAAGGTCCGG CATTGCGTAT TTGTAAGTTG GCCATTGAGT GGCCCAGGGA GCAGCTTTAT
GCACGCATTA ACCAGCGGTT TGAGCAGATG CTCAAGGAGG GGTTTATGGA GGAGGTGCAG
GGCTTGTTGT CGAGGGGCTA CCATGGGGAT TTACCGGCCA TGCGGGCGGT TGGTTATCGG
GCATTGATTG GCTATTTGCA GGGGGCTTAT GATTTAGCGC GGGCGGTGGA GTTGGGGCAG
CGGGATAGCC GACGTTATGC CAAGCGGCAG ATCACATGGC TTAAAGCAGA GCCGGGGTTG
CAATGGTTGG CACCTGAGGG GGCCAAACAG GCTGCTTTGG ACGAAGTAAG GGCATTTTTG
CAATTTTTTA AGAAAAAATA G
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| Protein sequence | MGPTASGKTG LALHLAEHFP LEIVNADSVQ VYRGMDIGSA KPTLQERQAI VHHLIDVTTP
DDPFSAGRFR TAALEVIEDC HRRGVIPALV GGTGFYFRAV EQGIAEIPEV DAQIVAELNR
RVCDEVGLAC CYAQLQQVDP PWAARVEPGD RQRIVRGLSV YLASGQPLSY WQQLSCQQAP
EGPALRICKL AIEWPREQLY ARINQRFEQM LKEGFMEEVQ GLLSRGYHGD LPAMRAVGYR
ALIGYLQGAY DLARAVELGQ RDSRRYAKRQ ITWLKAEPGL QWLAPEGAKQ AALDEVRAFL
QFFKKK
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