| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0275 |
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| Symbol | |
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| ID | 4482328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 312740 |
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| End bp | 313471 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721024 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_864208 |
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| Protein GI | 117923591 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000379715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTTG AAAACCGTAT TGCGCTGGTC ACCGGCGCGG GTTCCGGTAT TGGTAAGGCG
ATCGCCGAGG GCTACGCCGC TGCGGGGGCC ACTGTGCTGC TGCTGGGCCG CACCCAGAAG
AAGCTGGAAA ATGTCTATGA TGCCATTACT CAAGCCGGCG GCAAAGCCAC CATTGTACCC
ATGGATCTAG AAACTGGCCT TGGCGCTATT CCCGAACTGG TCAAAAATAC CTACGAACGC
TATGGACGCT TAGATATTCT CGTCAATAAT GCCGCCCTGC TGGGCACCCT CTCCCCCTTG
GCCAACTACC GGCCCCAAGA GTGGGAACAG GTGATGCGGG TCAATGTCAC CGCACCCTTT
TTTCTTATGC GTGAATTTAT ACCCCTGCTA ACACAAAGCG ATGATGCCTC CATCATCAAC
CTAAGCTCCG GTGTGGGCCA CCAGGGCCGT GCCTTTTGGG GCGCCTATGC CGCCTCCAAA
GCCGCCCTGA TTAACCTAAG CGAAACCTTG GCGCAAGAGT TGGAAAAAAG TCCGATCCGT
GTCAACACCG TTAACCCCGG CGCCACCGCC ACCACCATGC GCGCCAAAGC CTTCCCCGGT
GAGGATCCCA CCACCCTGCC CTCTGCCCAA GCCATTTTAC CGGTTTTTCT CTACCTGGCC
AGCCAACAAA GCAAAGATGT ACGCGGAGAA CACCTCAATG CCCGCGAATG GATGGATTGG
AAGGCCGTAT AA
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| Protein sequence | MLLENRIALV TGAGSGIGKA IAEGYAAAGA TVLLLGRTQK KLENVYDAIT QAGGKATIVP
MDLETGLGAI PELVKNTYER YGRLDILVNN AALLGTLSPL ANYRPQEWEQ VMRVNVTAPF
FLMREFIPLL TQSDDASIIN LSSGVGHQGR AFWGAYAASK AALINLSETL AQELEKSPIR
VNTVNPGATA TTMRAKAFPG EDPTTLPSAQ AILPVFLYLA SQQSKDVRGE HLNAREWMDW
KAV
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