| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0246 |
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| Symbol | rplM |
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| ID | 4483566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 280268 |
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| End bp | 280702 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639720995 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_864179 |
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| Protein GI | 117923562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0124742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAGTT TCGTGGCAAA ACCAAGCACA ATTGAACGTA AATGGTATGT CATCGACGCC
ACCGATATGG TGGTGGGTCG TTTGGCATCG GAAGTGGCCA AGCGTCTGCG CGGTAAGCAT
AAGCCTACCT ATACGCCGTT CATGGATTGT GGTGATAACA TCATCATCGT CAATGCGGAG
AAGGTGCGTT TTACCGGCAA CAAGCGCAAC GATAAGGTCT ACTACTGGCA TTCTCGGTTT
CCTGGTGGCC TAAAATCCAT TACCGCCGAT AAAGAGCTTT CTGGCAACCA CCCCGAGCGG
GTGCTGGAGA AAGCGATTAA AGGCATGCTG CCCAAAAATG TCTTGGGCCG TCAAATGTTT
CGTAAGCTGA ATGTGTATAA AGGGTCTGAG CATCCGCATA CGGCACAACA GCCTGAAGAA
CTGAAATTGG GTTAA
|
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| Protein sequence | MKSFVAKPST IERKWYVIDA TDMVVGRLAS EVAKRLRGKH KPTYTPFMDC GDNIIIVNAE
KVRFTGNKRN DKVYYWHSRF PGGLKSITAD KELSGNHPER VLEKAIKGML PKNVLGRQMF
RKLNVYKGSE HPHTAQQPEE LKLG
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