| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0233 |
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| Symbol | |
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| ID | 4481682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 262544 |
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| End bp | 264322 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639720979 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_864166 |
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| Protein GI | 117923549 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000891781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTG TTGCGCACTA TGCCGGGGAA CACTATGCGG AACAAATTCT GTTTCGTAAC
ATTCACTGGG AAGAGCTGGC ATCGGTTTTA TGCACATGTC CTGTAAAATC TATGCAGCCA
GGAGAGGTTT TACTGGATCC AAAACACCCC AATGAAACCA TCTATTTGGT TATTGAAGGG
CGTTTAAGCA TCCACTTAAA AGATTTGGAG ACCCCCCCCA TCGCCTCCAT TGGGCAGGGT
AGTTTTGTTG GTGAGCTCTC TATTATGGAT GAGAAATACC CCACGGCTTT TGTGGTGGTG
GAGCATCCCA GTCAGCTGCT GATGCTCTCT AGGGTTCACC TGAAGCAACT TATTGATTGC
AGCAGTACCT TTGTATTTAA TCTGCTGCAA GTTTTTTCGC ATCGTATGCG GTTTAGTACC
GAGGCACTCA TTGAGAGTCA TTTTGTGCGC ACGGTACCTG ATATTATTTA TCGTTTGGAT
GCCCAAGGAC ATTTTATTTA TCTTAATGAA TCCATTGAGA AACTTGGTTA TACCATGCAG
GAGTTACTGA GCCAGCATTT TAGTGTACTG GTCAGTGTGG AGGATCTGGA TTCGGTTAGT
TTTGATTCGG TGGTGGTCCG TCATCCGCAA GCAACACCCT CATCAGGCAC GGGCGTACAG
CCTAAACTGT TTGATGAACG GCGCTCTGGT GATCGCAAAA CCACGGGGTT GGAGTTAAAG
CTTTGTACCC GTGATACAGA ATCTACTCAG CGATCCATTA TTCATGCGGA GGTGAGCTGT
ACGGGTATTC AGGTCGAGTC GTTGGTTTCG GGTGTGCGGG ATTATCATGG CACCATTGGT
ATTATTCGGG ATGTGACCGA GCGCAAGCAG TTTATGACCC AGTTGAGTGA GCAGAAGGCG
CAAATGGAGG CGATTTTTAA TACCATTGCC GATGCGCTCT TGGTGACGGA TGTGTATGGC
ATTATTCAGT CGGCGAACCA TTCGGCCAGT GAGATTTTTG GATATTCGCA AGGGGAGCTG
TTGGGATGTT CCATAGGTAT GTTGTTGGAG GCCGAGCAGC ATGAAGATGC GGTTGTAAGT
CGTTGGACGG CGTTGGCAGG GCATCGTAAG GAGGTTAAGG TACGCCGCAA GGGTGAACAG
ATTTTTGAAG CGGAGATGTC GGTTTCACAG GTTTTTCTGG AAGATCGCAT TTTGTATACT
GGGATTATTC GCGACATTAC TGAGCGCAAG GAGGCGGAGC GGCGCATTAC CTATCAGGCC
AATTATGATG CTTTGACGGG TATACCCAAC CGCAGTTATT TCCAACAGTT GCTTAATCAA
TCCATACAAC GGGCGGCGGC GGAAGGCAAA CGGTTAGCGA TTATATTTAT TGATTTGGAT
CGGTTTAAGT GGGTAAACGA CAATTTGGGA CATGGTGCAG GGGATGAGTT ATTGAGGTTA
TCGTCGAAGC GGGCGGCCAG TTGTTTGAAG GGGCGGGATA CGGTGGCGCG TTTGGGAGGG
GATGAATTTG TTGCGATTCT GGAGCATGTT GGGGATACGG AGCAGGCATT TGCGGTGTCC
AAGCGGGTAT TGGAGAGTTT AAACCGGCCC TTTATGTTGG ATGGCAAGGA GGTTTACATC
TCGGGGTCGA TGGGGGTTGC GATTTATCCA CAGGATGCGA CACAGCCGGA GGAGTTATTA
ACCCGTGCGG ATGAGGCGAT GTATTGTTCT AAGCGTGCGG GACGCAATGC GTGTCATTTT
GTGACGGGGG AATCTTTTCA GATGGAGAAG AAGTATTGA
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| Protein sequence | MAVVAHYAGE HYAEQILFRN IHWEELASVL CTCPVKSMQP GEVLLDPKHP NETIYLVIEG
RLSIHLKDLE TPPIASIGQG SFVGELSIMD EKYPTAFVVV EHPSQLLMLS RVHLKQLIDC
SSTFVFNLLQ VFSHRMRFST EALIESHFVR TVPDIIYRLD AQGHFIYLNE SIEKLGYTMQ
ELLSQHFSVL VSVEDLDSVS FDSVVVRHPQ ATPSSGTGVQ PKLFDERRSG DRKTTGLELK
LCTRDTESTQ RSIIHAEVSC TGIQVESLVS GVRDYHGTIG IIRDVTERKQ FMTQLSEQKA
QMEAIFNTIA DALLVTDVYG IIQSANHSAS EIFGYSQGEL LGCSIGMLLE AEQHEDAVVS
RWTALAGHRK EVKVRRKGEQ IFEAEMSVSQ VFLEDRILYT GIIRDITERK EAERRITYQA
NYDALTGIPN RSYFQQLLNQ SIQRAAAEGK RLAIIFIDLD RFKWVNDNLG HGAGDELLRL
SSKRAASCLK GRDTVARLGG DEFVAILEHV GDTEQAFAVS KRVLESLNRP FMLDGKEVYI
SGSMGVAIYP QDATQPEELL TRADEAMYCS KRAGRNACHF VTGESFQMEK KY
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