| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0193 |
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| Symbol | |
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| ID | 4483474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 208802 |
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| End bp | 211576 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639720938 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_864126 |
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| Protein GI | 117923509 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0289682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGCC CTCCCTATCG CCTCTCTCTT TCCAAACGGT TTGGTTTGGT GATCGGCATG
GCACTCTTGG TGGTGGCCTT GCTACTGGGT ACCATGCTGG CCCAGGGGAT GGACCGCAAC
TTTGAACAAC AGTTGCAACA CCTGCACGAG CTGCATCTTA ACCGCTTAGC CCAACAGTTG
CGCCAGTATA TCCAGAGCCG CCTCACCGTA CTGGCAGATA TGGCTGCCAA TCCCTTAACC
ATACAAGGGG TATTGCAACC TGAAACCAGT CTGCTTAACA CCATCGACTG GCTACAAAAT
TCCCGTTTAA TTGGGGAATC GTTTCCACTC ATCCTCATGG ATTATCAAGG TCAGATACTC
CACCAGACGG TGGGCGATGA GCAGCCAGCC CCAACGGCCG TGCGAGCTGT ATTAGGGGGT
AAGCAGACCC AAATACAATA TCTGGAGGGT GATCACCTCA ATGGAGATCA TCAGCTCTGG
TTAATTACCC CCGTTCGTTG GCAAGCCAGT ATCGAAGGGG CCCTGGCCGT GCGCATACCC
CTGCAACACA TTTCTCCCCT CACCGCCCAG CAGGGCCATT TTAACCATGA TGGCATTCGT
CTGTGGCAAG GTAATCGGCT GTTGTTCAGT CAGGGGCAGA TGGAAAATGG CTATAGTAGC
CGTAAAATCT TGGGTGAATT GGGTCTGACC ATTGAACTGG TCATGGACCA AAAACCCCTT
ATCAAAGCCC GCTCTAAACT CTTTAGAGAG ACCTTGATAG TGGGTATCTT GCTGCTTTTA
CTCTTGAGTG TGACCCTCTA CTACTGGGGG CAAAAGCGGC TGGTTAGACC ACTGATGGCA
CTTTCACGCC AAGTTGATGC CGTCACCAAA GGGGATGATC CGGCCCCGCC CATGGGGACC
AAAATGGGTA CCACCATTGT AGAAATCATC CAACTGGGGG AAAAATTTGA CCATATGCAT
AAGGAGATCA CCGCAACCCG CCGTCACTTG GAAAGCTTAG TCAATGAGCG TACGCAAGCG
TTGCAAATAG AGCTGCAAGA GCGTACCCGT ACGGCGGCTG AATTGCGTTT GCTCAACGAT
TTACAAGAGG CCATTTTAGA AAGCGCGGAT GCCATGATTA TCGCCACTGA TGCAGCGGGC
ACCGTGATTA AATTTAACAA AGCGGCTCAA CATAAGCTGG GTTATGCGGA CCATGAGGTC
ATCTACCGCT TAACACTGGA TGCCTTTCAT GACCCCATGG AACTACAGCA TCGCCACCTA
CCCGTGACAG AGGGTGATAC GCAAAATTTG AGCATACCCC TACAGACGCT CTTTTCCCGA
GCCGCTCAAA ATAGGACGGA CGAGCGCGAA TGGCGCTACC GCCGTCAAGA TGGTACGACC
TTTCCAGTGC GTCTCTCCAT AACCCAGGTG TGGGATGTGG AAAGTAATAA CCGGCGCGGG
TTTTTGGTGG TAGGTATGGA TATTACCGAG CTCAAAAGCT TTCAGCAGGC CCTGCTGCGT
AACCAAGCAA ATCTGGCCCA TGCCCAAGCG ATCGCTCACC TAGGTAGTTG GCAATGGGAA
CTCGAAAATG GCCGCATGCA CTGGTCGGAT GAGACATTTC GTATTTTTGG CGAACCGCTG
CAAAGCTTTG AACCAACTTT TGAAGATATT TTAAGCCGTA CGCACCCACA GGATATGAAA
TCTTTAGAGC AGATGGTTAC ACGCGCACTC GCCAATCCAG AGATCCCTTT TGAAATGGAA
GCTCGACTAC GCCGTGCCAA TGGTGATCTG CGTTCCGTGG TGATGCTGGG AGAGGTCACC
TATGATCAAA ACCGTAAACC CATTCGGGTT TCAGGTACCG TGCAGGATAT TACTGAGCGG
AAAAAAGCTG AGGATAGTCT ACAGTTAGCC AAACAGATTA TTGAGTGTAC CAGCGAGGCC
ATTGTTATCA CCGATGCCCA AGGTATCATA ACCGATATCA ATCCTGCCTA TGAAGAAATC
ACCGGTTACA GTAGGGGAGA GGTGATTGGT CAGAGTCCAG CCATCACTCA ATCAGGGCGT
CACGATCCAA CCTTTTATCA GCAGCTGTGG CACCTTCTGC AACAGACAGG CCATTGGGAA
GGGGAGATGT GGGATCGTCG TAAAAATGGT GAGCTTTTCC CCAAATGGCT GACCATCAAT
GCGTTACACA ATCTTTACGG TCAGGTAAGC CACTATGTGG GTATTTTCTT GGATATTACC
AAACAAAGGG GTGAAATCGA ACGATCCAAA CAGAACGTTT TCTACGATCC TTTAACCAAG
CTGCCTAACC GTATCCTGTT TCAGGATCGT TTAGAGCATA TCTTGGCGGT CGCAGCTCAT
AAGCAAGAAC GTATAGGGCT TTTTTTTATT GATTTGGACC ATTTTAAACA GGTTAACATC
AACATAGGTC ACGATGTGGG GGATCTGTTA CTGGTGGAGG TTGGTAAACG TCTGCGTCGG
CACTTACCCC CCAGTGATAC GGTGGCGCAT TTGGTCGGGG ATAAATTTGC GATTATTCTA
CCCCATAGCC GCACCCGTAC TGAATTGGCG CAGCTTGCCG AAACAATACT TCATCTTTTT
GACGAATCTT TCCTCATTCG CGATCATAAT CTTTCAATCG GTTGCACCAT TGGTATTGCG
GTCAGTCCCG CAGACGGTAC GGTTTATCCC GAGCTCGCGA GAAACAGTAA TACGGCCCTT
TACCGTACCA AGGGTTTGAC CCGTGGCCGT TTTGCGTTTT ATAGCGAAGA GATCTCGTCT
TCTCCCATGC CATAA
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| Protein sequence | MECPPYRLSL SKRFGLVIGM ALLVVALLLG TMLAQGMDRN FEQQLQHLHE LHLNRLAQQL
RQYIQSRLTV LADMAANPLT IQGVLQPETS LLNTIDWLQN SRLIGESFPL ILMDYQGQIL
HQTVGDEQPA PTAVRAVLGG KQTQIQYLEG DHLNGDHQLW LITPVRWQAS IEGALAVRIP
LQHISPLTAQ QGHFNHDGIR LWQGNRLLFS QGQMENGYSS RKILGELGLT IELVMDQKPL
IKARSKLFRE TLIVGILLLL LLSVTLYYWG QKRLVRPLMA LSRQVDAVTK GDDPAPPMGT
KMGTTIVEII QLGEKFDHMH KEITATRRHL ESLVNERTQA LQIELQERTR TAAELRLLND
LQEAILESAD AMIIATDAAG TVIKFNKAAQ HKLGYADHEV IYRLTLDAFH DPMELQHRHL
PVTEGDTQNL SIPLQTLFSR AAQNRTDERE WRYRRQDGTT FPVRLSITQV WDVESNNRRG
FLVVGMDITE LKSFQQALLR NQANLAHAQA IAHLGSWQWE LENGRMHWSD ETFRIFGEPL
QSFEPTFEDI LSRTHPQDMK SLEQMVTRAL ANPEIPFEME ARLRRANGDL RSVVMLGEVT
YDQNRKPIRV SGTVQDITER KKAEDSLQLA KQIIECTSEA IVITDAQGII TDINPAYEEI
TGYSRGEVIG QSPAITQSGR HDPTFYQQLW HLLQQTGHWE GEMWDRRKNG ELFPKWLTIN
ALHNLYGQVS HYVGIFLDIT KQRGEIERSK QNVFYDPLTK LPNRILFQDR LEHILAVAAH
KQERIGLFFI DLDHFKQVNI NIGHDVGDLL LVEVGKRLRR HLPPSDTVAH LVGDKFAIIL
PHSRTRTELA QLAETILHLF DESFLIRDHN LSIGCTIGIA VSPADGTVYP ELARNSNTAL
YRTKGLTRGR FAFYSEEISS SPMP
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