Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0174 |
Symbol | |
ID | 4481554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 189641 |
End bp | 190978 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639720919 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_864107 |
Protein GI | 117923490 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0062474 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCA CCCATCCCGG ACGCACCATC CGTAGCGGCG CCACGCAAAA CCTCTCCGGC ACCATCCGCC CCGCCGCCGA TAAATCCATC TCCCACCGCT CCGTGATCTT TGGCGCCCTG GCCGAAGGCG AAACCCACGT TAAAGGCATG CTGGAAGGCG AAGATGTGCT GCGTACCATC ACCGCCTTTC GTACCATGGG TATCTCTATC GAACGCTGCA ACGAAGGTGA ATACCGCATC CAAGGCCAAG GACTCGACGG CCTAAAAGAA CCCGATGACG TGCTGGATAT GGGTAACTCC GGTACCGCCA TGCGCCTGCT GTGCGGCCTG CTGGCCAGCC AACCCTTTCA CTCTATCCTC ACCGGCGATC ACTCCCTACG CAGCCGCCCC ATGGGCCGCG TAGTGCAACC CCTAACCAAA ATGGGCGCTC GCATCCGTGG CCGCGACGGT GGCCGCCTGG CCCCCCTCGC CATCGAAGGC ACTGAACTGG TACCCATTAC CTACAATAGC CCCATCGCCT CGGCCCAAGT GAAGTCCGCC ATTATCCTGG CCGGACTCAA TACCGCCGGC GAAACCACCA TCATTGAACC CGCCGTCAGC CGCGACCACA CCGAACGTAT GCTCATCGCC TTCGGTGCCG AAGTGACCCG CGATGGCAAC CAAGTGACCA TCGAAGGCTG GCCCAACCTG CAAGGCCAAG AGATCGAAGT GCCCGCCGAT ATCTCCGCCG CCGCCTTCCC CATGGTGGCC GCCCTTATCA CCCCAGGATC TGATATTATC CTGGAAAATG TGGGTATGAA CCCAACCCGT ACCGGTATTC TCGACCTGCT CCTGGCTATG GGCGGCAATA TCCAACGCCT CAACGAACGG GAAGTTGGCG GCGAACCCGT GGCCGACCTA CAGGTGCGCT ACTCCCAACT CCAAGGCATC GAGATAGACC CCACCGTGGT GCCCCGTGCC ATTGATGAGT TCCCCGTGTT TTTTGTAGCC GCCGCCCTCG CCCAAGGCCA AACCCTGGTG CAAGGCGCCG AAGAGCTGCG CGTTAAAGAG AGCGACCGCA TCACCGCCAT GGCCAACGGT CTTAAAGCCC TAGGTGCCAT CATAGAAGAA CGCCCCGATG GCGCACTTAT TACCGGAAAT CCCGACGGTC TGGCCGGTGG GGCCAGCGTA GACTCCTTTA CCGACCACCG TATCGCCATG AGCCTGCTGG TGGCCGGCCT GCGCTGTAAA GAGTCCGTAT TGGTGCAACG CTGCGATAAT ATCAATACCT CCTTTCCCAG CTTTTCCCAA TTAATGAACA GTCTTGGTTT TCAATTGGAG GATGTCAGCC ATGGCTGA
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Protein sequence | MSSTHPGRTI RSGATQNLSG TIRPAADKSI SHRSVIFGAL AEGETHVKGM LEGEDVLRTI TAFRTMGISI ERCNEGEYRI QGQGLDGLKE PDDVLDMGNS GTAMRLLCGL LASQPFHSIL TGDHSLRSRP MGRVVQPLTK MGARIRGRDG GRLAPLAIEG TELVPITYNS PIASAQVKSA IILAGLNTAG ETTIIEPAVS RDHTERMLIA FGAEVTRDGN QVTIEGWPNL QGQEIEVPAD ISAAAFPMVA ALITPGSDII LENVGMNPTR TGILDLLLAM GGNIQRLNER EVGGEPVADL QVRYSQLQGI EIDPTVVPRA IDEFPVFFVA AALAQGQTLV QGAEELRVKE SDRITAMANG LKALGAIIEE RPDGALITGN PDGLAGGASV DSFTDHRIAM SLLVAGLRCK ESVLVQRCDN INTSFPSFSQ LMNSLGFQLE DVSHG
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