| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0171 |
|---|
| Symbol | |
|---|
| ID | 4481551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 185502 |
|---|
| End bp | 186671 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639720916 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_864104 |
|---|
| Protein GI | 117923487 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCTA CCAAACACCC TCTTTCCGTG GCCTATGTCA ACAGCATCGA CCTGCCGGAT
AATCGACGGG CCCATGCCAT GCAGATGCTT AAAAATGGAC AGGCTTGGTC CCAGTGCGTG
GAGCAATTTG AATTTATTAC CAATGTCTGG TGGCATAATC GCAACCGCCT AACCGTTGAA
AATATGGCGG CCTTTTATGG ACTAACCCAC CCCTTTACCC TAATCCCCTA TCCCCTGCGC
CGTTTAGAGC AGTCGCAATA TCGTTGGCTG CGTGAGCTCT ATTTTCAATT GGCCGCTTGG
CGTTGTAAGC GCAAACGGGT TGATCTGGTC TATACCCGCA CCTATCCCCT GCTGGCATAC
ACGCTGAAAT TGGGTATCCC TACCGTGGTG GAAACCCACA GCCCACCTGG TCGAAATGAA
GAGGCTGACG CCATGCTGAG TCTGGCCGAC CATCCAAATT TAGTGGCCTT GACCACCATC
TCCGAACCTT TGGCTGAGAG GTATCGTGCC TTTGGCGTGC CCGCCGATAA AATCATGGTG
CTGCCCGATG GGGTGGATTT GGAACGCTTT GAACCGGCCC TAACCCTTGC CGAAGCACGA
CAGCAGTTGG GCCTGCCCCT TAATCAGAGC ATCGCGACCT ATGTGGGGCA CCTCTACGAG
GGACGCGGCA TTGATACCCT GCTGAGTGCG GCACTCAAGC AACCCAAGGT GCTGTTTTTA
ATTGTTGGTG GTTATGCCAA GGATATGGAG CGCTGGCAGC ATCGTGCCGC GCAGATGGGG
CTGGAAAACG TACGCTTTGA AGGCTTTGTG GCCAATGAAC GGGTGCCGCT CTATCTATGG
GCAGGGGATG TTCTGGTCAT GCCCTACGGC AACGCTTGTA CCACCACCGA GTGGATGTCG
CCTCTAAAAC TGTTTGAATA CATGGCGGCC GGTCGGCCCA TTATTGCATC GGATTTCCCC
ATTTTGCGGG AGGTACTTGA GAATGGGAAA AACGGCCTAC TGGTTCCACC AGATGATGGC
GAGGCGTTGG CCGCAGCCAT GGATGCGTTG CTGGCCGATG CACCAAGGCG GCAGGCACTG
GGGGCGGCGG CTCTGCACCA AGTAAGGCCA TACAGTTGGG TCAATCGGGT GGAGCAGGTT
ATCAACCGCT TTAATCGCTA TGGCCAATGA
|
|---|
| Protein sequence | MPPTKHPLSV AYVNSIDLPD NRRAHAMQML KNGQAWSQCV EQFEFITNVW WHNRNRLTVE
NMAAFYGLTH PFTLIPYPLR RLEQSQYRWL RELYFQLAAW RCKRKRVDLV YTRTYPLLAY
TLKLGIPTVV ETHSPPGRNE EADAMLSLAD HPNLVALTTI SEPLAERYRA FGVPADKIMV
LPDGVDLERF EPALTLAEAR QQLGLPLNQS IATYVGHLYE GRGIDTLLSA ALKQPKVLFL
IVGGYAKDME RWQHRAAQMG LENVRFEGFV ANERVPLYLW AGDVLVMPYG NACTTTEWMS
PLKLFEYMAA GRPIIASDFP ILREVLENGK NGLLVPPDDG EALAAAMDAL LADAPRRQAL
GAAALHQVRP YSWVNRVEQV INRFNRYGQ
|
|---|
| |