Gene Mmc1_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0073 
Symbol 
ID4483643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp79378 
End bp80193 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content56% 
IMG OID639720819 
Productflagellin domain-containing protein 
Protein accessionYP_864008 
Protein GI117923391 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.18595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGT ATATTAACAC AAACATTGCA GCATCCAATG CCCAGCGTCA GTTGACGAAG 
AGCACCAATG CTTTGGGCAA GACCTATGAG CGTCTCTCAT CAGGGCTGCG CATTAACAGC
GCTTCGGACG ATGCCGCCGG TTTGACCGTT TCTTCTCGCA TGACTGCGCA GATCCGTGGT
TTGAACCAAT CGGCTCGTAA TGCCAACGAT GGCATCTCTT TGGTGCAGGT GGCCGAGGGT
GCGTTGGCTG AGACCGAAGC GGCTTTGCAG CGCATGCGTG AACTGGCGGT GCAGGCGGCC
AGTGGTTCCT ATAACAACAC GGATCGTTCC GATTTGAATG ATGAGGTCAC GCAGCTCGTT
ACGGAGATCA CCCGTATCTC CACGGACACC AAGTTTAATG GGGTGTCGTT GATGAGCAGC
AACCAGACCT TCGATATTCA AGTGGGTGCC GATGTGGGTC AAAAGATCAC TGTCAGCACC
CAAGGTGCGG GTGCCTCGCT GCTGGGTGTG ACCACCGCCA GCATCACCTC GGCGGGTTTG
GCCAGTATCG CCATTGGTAA GATTGACGCC GCCATTGCCA GCGTATCGGA TATGCGTTCG
GTGCTGGGTG CGCAGCAGAA TCGTCTGGAA GCGGCCATTA CCAACCTGAG CAATGTTTCT
GAGCGCACCC AAGCGGCCCG TTCGCGCATC ATGGATGCAG ACATTGCCCA AGAGACGGCC
AATCTGACCA AGCAGTCCAT TTTGCAGCAA GCTGGGGCGG CGATGTTGGC GCAGGCCAAC
CAGCAACCAC AGATCATGTT GAGCCTCTTA CGTTAA
 
Protein sequence
MSLYINTNIA ASNAQRQLTK STNALGKTYE RLSSGLRINS ASDDAAGLTV SSRMTAQIRG 
LNQSARNAND GISLVQVAEG ALAETEAALQ RMRELAVQAA SGSYNNTDRS DLNDEVTQLV
TEITRISTDT KFNGVSLMSS NQTFDIQVGA DVGQKITVST QGAGASLLGV TTASITSAGL
ASIAIGKIDA AIASVSDMRS VLGAQQNRLE AAITNLSNVS ERTQAARSRI MDADIAQETA
NLTKQSILQQ AGAAMLAQAN QQPQIMLSLL R