Gene Mmc1_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0062 
Symbol 
ID4482383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp66117 
End bp66887 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content54% 
IMG OID639720808 
Productflagellin domain-containing protein 
Protein accessionYP_863997 
Protein GI117923380 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0591459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACGC GCGCTTCCAA CGGTTTGCAG ACCCATTATG AGCGGTTGGC ATCGGGACGG 
CGGATTAACT CGGCGGCGGA TGATGCCTCT GGTTTGGCCA TTACCAGTCG GACCACGGCT
CAGGTTAGGG GTTTTAACCA AGCATCGCGA AATGCCAATG ATGGAATCTC CTTTTTGCAG
GTAGCCGATG GTGCCTTGGA GGAGACCCAT GCCATGTTAC AGCAGCTGCG TGAGTTGGCG
GTAGAGTCGG CCAATGGCAG TTACAATGCG CTGGATCGTG GCAATATGCA GCAGGTTGTG
AGTGAGTTAA CCGCTGAGAT TCAACGGATC GGTAGCGAAC GTAAATATAA CGATCATGTG
ATGCTGGATG GCACCTTTGC CAATCAGACG TTTCAGATCG GTGCGTTTAG TTCAGAGAAC
ATAACCGTCA CCATCGCTTC GGCGACCGCC AGTGCGTTGG GTGTGGAGGA TCTCTCGTTT
TCGACACAGG CTAAAGCAGA GGCCGCTTTG GCGACCCTCG ATAGCGCTTT GGATGCGGTC
TCTGATATCC GTCTGGATCT AGGGGCTGTG CAGAACCGTT TTATGTCGGC GATGGGTAAT
TTAGGCAGCA TGTCCATGCA TACATCGGCC ATGCAGTCCC AGATGATGGA TACCGATATG
GCGGCTGAAA CGGCTTTGCT TACGAGAAGT TCTGTCATTC AGCAGGCGGG GGTGGCCATG
TTGTCACAAG CCAACCAGCG GCCACAGTTG GCGCTGCAAC TATTGGCATA A
 
Protein sequence
MLTRASNGLQ THYERLASGR RINSAADDAS GLAITSRTTA QVRGFNQASR NANDGISFLQ 
VADGALEETH AMLQQLRELA VESANGSYNA LDRGNMQQVV SELTAEIQRI GSERKYNDHV
MLDGTFANQT FQIGAFSSEN ITVTIASATA SALGVEDLSF STQAKAEAAL ATLDSALDAV
SDIRLDLGAV QNRFMSAMGN LGSMSMHTSA MQSQMMDTDM AAETALLTRS SVIQQAGVAM
LSQANQRPQL ALQLLA