| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0002 |
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| Symbol | |
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| ID | 4480629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1570 |
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| End bp | 2700 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639720748 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_863937 |
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| Protein GI | 117923320 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTC ACGTCAGCCG CGAACCCTTT CTCAAAGCCC TGCAACGTTT GCAGAGTGTG
GTGGAGAAGC GTAACACCAT GCCAGAGTTG GGCAATGCCC TGCTGGAAGC CAGCGCCGAG
GGTCTAACCC TCACCGCCAC CGACCTAGAG GTCTCCATGA AGAGCCACTG CCCCGCCGAG
GTGGAGAGCA GCGGTGCCAT TGCGGTTTCG GCACGTAAGC TGTTTGAGAT CGTACGGGAG
CTGCCTCAAG ATAGCCTGCG GCTACGCAGC GAAGCTGGGG AGCGGCTGGT ACTAACCTGT
GGTCGCGCCC GTTTTACCCT GGTGGGTATT AGAGCGGATA TATTTCCCCC CTTTCCGGAG
ACCACCCAGG GACAAAGCTT TACCCTGTCT GGCCCGCGTC TGGCCGAGAT GATCGCCAAG
ACCCACTTTG CCATGAGCCA GGATGAGACC CGTTATACCC TGAACGGCAT TTTGCTGCAT
CTGGTCAGCG CCGCCGATGC CGAGTTGGCA GGGGAGAACG GCTTGGTGCG GATTGTCGCC
ACCGATACCC ACCGCTTAGC CATGGCTGAA ATGGCGCTGG ATATCCCGGT GGAGGAGAGC
GCTGAGTTGA TTATTCCCCG CAAGGGGGTG CAGGAGATCC GCAAGCTGGT AGAAGAGGAT
GATGAGGCGG TAGAGCTGGG CCTGGATGAA AATTTTATCC GCGTTTCCAA GCCAGGTATT
GTGCTTACCT CCAAGCTGGT GAGTGGGCGT TTTCCCAACT ATCAGCGGGT GATTCCCACC
GACAACCCTC ATCTGCTGGA GCTGGAGAAG GAGCCTCTGT TTGGGGTGGT TAAGCGGATG
ATGGTGCTCT CTCACGAAAA ATCCCGTGGT ATCCGCATGG CGCTGAGCTC GGACCACATT
AAGGTGAGTG CGCAAAACCC CGAGCAGGAG GCTGCGGAAG AGGAGATGCC CTGCTCTTTT
GCCGGTAAAG ATATGACCGT GGGCTTTAAT GCCCGCTATC TGCAAGAGAT TGTCTCGGTT
GCCAATGGGG ATACCGTGCG CATGAAATTG CGCGATGAGG AGTCCCCCGT GTTGGTTGAG
GAGCACTCGG CTACCGGCTA TCTGTATGTA CTCATGCCCA TGCGGGTGTG A
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| Protein sequence | MEFHVSREPF LKALQRLQSV VEKRNTMPEL GNALLEASAE GLTLTATDLE VSMKSHCPAE
VESSGAIAVS ARKLFEIVRE LPQDSLRLRS EAGERLVLTC GRARFTLVGI RADIFPPFPE
TTQGQSFTLS GPRLAEMIAK THFAMSQDET RYTLNGILLH LVSAADAELA GENGLVRIVA
TDTHRLAMAE MALDIPVEES AELIIPRKGV QEIRKLVEED DEAVELGLDE NFIRVSKPGI
VLTSKLVSGR FPNYQRVIPT DNPHLLELEK EPLFGVVKRM MVLSHEKSRG IRMALSSDHI
KVSAQNPEQE AAEEEMPCSF AGKDMTVGFN ARYLQEIVSV ANGDTVRMKL RDEESPVLVE
EHSATGYLYV LMPMRV
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