| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1805 |
|---|
| Symbol | |
|---|
| ID | 5329096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1768192 |
|---|
| End bp | 1768932 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640794355 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001331009 |
|---|
| Protein GI | 150403715 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0545186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000660342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTC TACCCTTAGC AGTTGTTGCC GCTTTATTCG TGGTAGGTAT GTGTATCATA
ACTCCGGAAA TTCAGAATAA TGATTGTATC ATAGTTGGCA TATATCCACA TATGCCCCCG
TATCAGTATT ATAAGAATGG TGAATTGAAA GGATTTGAAA TAGATCTTAT CAATGAACTT
GGACGAAGAA TGGATAAAAA AATCATATTT GTAGAAACTA ATTACAAATA TGGAAATTAT
CTTGCAGGAA AATCTGGAAA TGTTGATTTT TCAATTTCTG CAATTACAAA AACTACACAA
CGTGAAAATG ACGTGGTTTT TTCTGATATT TACATGTATT CTTACTGCTC CCTCATTACC
AACGATAAGA AATATACTAA ATTAACAGAT TTCAGAGATA AAAAAATAGG TGCCCTGGCA
GATTCCACAT TTGAAGATCT TGCAGAAGAT TATCTAAAAA GTATGAACTT TGAATTAATT
AGATACGATA ATTTTCAAAG TATGCATTCT GATCTTTTAG CAGATAATTT AGATGGGGCA
TTTACCGATT ATCGATATCA CCTGAACACT GATGATAAAA CCGGGCCTTA TCTGGTAGAA
AATCTTGAAA TACATTATTT TGGAGTGGTG TCTTCAAAAG ATAACAAAGA TTTGATAGAT
GAAATAAATA TGGAATTATT GAATATGAAA GCGGATGGAT CCCTTGAAAG TTTAAATGAG
AAATATTTCG AATTTAACTA A
|
|---|
| Protein sequence | MNPLPLAVVA ALFVVGMCII TPEIQNNDCI IVGIYPHMPP YQYYKNGELK GFEIDLINEL
GRRMDKKIIF VETNYKYGNY LAGKSGNVDF SISAITKTTQ RENDVVFSDI YMYSYCSLIT
NDKKYTKLTD FRDKKIGALA DSTFEDLAED YLKSMNFELI RYDNFQSMHS DLLADNLDGA
FTDYRYHLNT DDKTGPYLVE NLEIHYFGVV SSKDNKDLID EINMELLNMK ADGSLESLNE
KYFEFN
|
|---|
| |