Gene MmarC7_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1625 
Symbol 
ID5327937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1577052 
End bp1577366 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content42% 
IMG OID640794179 
Producttranslation initiation factor IF-1A 
Protein accessionYP_001330834 
Protein GI150403540 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGAC AACAAGCACC CCCACAACAA CCAACAAGAG TAAGGACCCC AAGAGAGAAT 
GAAAATGAAG TTCTTGGAGT AATCGAACAA ATGCTCGGTG CAAGCAGAGT TAGAGTAAGA
TGTATGGATG GAAAGCTCAG AATGGGTAGA ATTCCCGGAA AATTGAAGAG AAAAATCTGG
GTAAGGGAAG ACGATGTCGT AATTGTTACT CCTTGGGAAG TACAGTCCGA TGAGAAATGC
GATGTAATCT GGAGATACAC AAAAGGACAG GTTGACTGGT TGAACAAAAA AGGATACCTA
GACTTCATGA GATAA
 
Protein sequence
MRGQQAPPQQ PTRVRTPREN ENEVLGVIEQ MLGASRVRVR CMDGKLRMGR IPGKLKRKIW 
VREDDVVIVT PWEVQSDEKC DVIWRYTKGQ VDWLNKKGYL DFMR