| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1543 |
|---|
| Symbol | |
|---|
| ID | 5329218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 1507105 |
|---|
| End bp | 1507809 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640794097 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001330752 |
|---|
| Protein GI | 150403458 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.686883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0297617 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAA TTATAAGTCT TGAAGATGTT TGGAAAATCT ACCAGATGGG TGAAGTTGAA
GTTCAAGCCC TAAAAGGAGT TTCCCTTGAC GTAAATAAAG GTGATTTTGT CGCAATTGTT
GGATCGTCAG GTTCTGGAAA ATCAACCATG ATGAATATGA TAGGATGCCT CGATGTACCA
ACAAAAGGTG ACGTTTACCT TAAAACCAAA AATATCTCAC ACATGACTGA ATCAGAACTA
TCTGAACTTC GTGGAAAGAC AATTGGTTTT GTATTTCAGC AATACAATTT AATTCCAAAC
ATGACTGCAC TTGAAAACGT ACTTTTACCT TTGCAAATAC AAGAAGTCAA TGATTCCACT
GCAGATAGGG CTGCAAAGAG AGCATTGAAA CAGGTTGGTC TGGAAGATAG GATGAATAAC
AAACCATCAC AGCTTTCTGG AGGCCAACAA CAGCGAGTAT CGATTGCAAG AGCGTTAGCA
TGTGACCCCG AAATAATTCT TGCAGATGAA CCAACTGGGG CGCTCGACAG TGCGACTGGT
AAAGAAATTA TAAAATTATT TATGGCCCTA TGGGAAAGTG GAAAAACCAT TATTATGATT
ACGCATGACC CCGATCTTGC AAAATACGCG AAGACCATTG TTGAATTAAA AGACGGAAAT
ATTATTAGTA TAACAGACAA CAAACCAAAT ACAATTCATG AGTGA
|
|---|
| Protein sequence | MYKIISLEDV WKIYQMGEVE VQALKGVSLD VNKGDFVAIV GSSGSGKSTM MNMIGCLDVP
TKGDVYLKTK NISHMTESEL SELRGKTIGF VFQQYNLIPN MTALENVLLP LQIQEVNDST
ADRAAKRALK QVGLEDRMNN KPSQLSGGQQ QRVSIARALA CDPEIILADE PTGALDSATG
KEIIKLFMAL WESGKTIIMI THDPDLAKYA KTIVELKDGN IISITDNKPN TIHE
|
|---|
| |