Gene MmarC7_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1411 
Symbol 
ID5329498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1374872 
End bp1376968 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content30% 
IMG OID640793969 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001330625 
Protein GI150403331 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAG TAAATAATAT AAGAACTAAA TTAATGTTAA CATCCATAAT TGGGCTTGCA 
CTCCCGATAT TAATACTCAC GATCGTTTCA AATTTAACGA CCGAAAATTA CTCTAACTAT
GAATCTTTAG AAAAGCTTGA TCTTTCGAAA AAGTCTATAT CGTATAATTT AGACCAAAAA
AATGAAGAAA TGGCTAGTTT TTTAAAATAC TTATCAGAAA ACGAAAATAT AAAAAGTTAT
ATCATTGAAA ATAATTTTAA TTCCCTAAAT ATCGAATCCG AAAATATCAA ATCTAGTTTG
GGGGTTGATG AAGTAATTTT TTTAGATGAT TATGAAAATG CAATAACTGA AAATGAGTTA
AACAATAATT TTGATTTTAA AAACCTAAAT TCGGGCTATT TACTTATAAA AAATGGTAAT
TTGAATCAAT TTTCAGTAAT ACAAGTTCAA AATATCTATA AAAATCAAGA ATTAGTTGGA
TCAGTTGTTA TTATTGATTA TTTAGATGAA AATGAATTTG TAAATAATTT AAAAGATTTT
TCAAATTTTG ATGTTTCACT ATATATGAAT GGAATGTTTG TATCAACAAC GCTAGCTGAC
AAGGCTAAAC TATCCCATAT TTCTAGCTTT TTTGAAAATT CAGCGTCAGA ATCTGAATAT
GAAAGTTTTT TAGAATCTGG TAACGATTAT TTAAAGATAG AAGATGTGCG AGGCAATCTT
TTAGGATATT TAGTAATATC TACTCCAAAA AGCACGGCTT TGAGTTATTT AACTGCTGCA
AGAAGTCATA ATTTAATTGT AGCATTTTTT GGATTTGTAG TTTCTATTGT CGTATCATTA
ATTTCTTCGA GAAACCTTAC AAAACCAATA ACCAAACTTA AAAATGGGGC AGAACAGTTT
TCAAAAGGAG TTTATGATCA TAATATCGAT GTAAATACGG GCGATGAATT AGAAGATCTT
GCAGATTCAT TTAATAAGAT GGCAAATAGT ATAATGACAC TTAATGATCT TATAGATACG
GATAGAAAGA CAATGGCAAA AACATTACAT GAATTATCTG ATTTTATGTA TGAAATGTCT
CGTGGAAACC TTTCAGTTAG ATTGGATGAA AATCAGGATA AAAACAGGCT CCAAAAGAAT
GTGAATCAAG CCATAAATAA TTTTTCACAA CTTTTGAAAT CGGTTCAGTC TGAAGTTTCT
GTTCTTGATC AGCAGACAAT AAATCTCAAT AAAGAACTTA CAACAACAAT GACAATATCT
GAGGGAGTTA AAGATGCAGC AGACCATGTA GCGTCTTCAA CTGGCGAACA ATGTACGAAA
CTACAGGAAA TTTCTGAAGA TATTAAATCA ACTGCGAAAG CTGTTGAAAA TGTAAATTCT
GCAGTTTTGA ATACAACGGT CGCTTCAAAA GAAATTAATC AAAATTCAGA AATGGGTGTC
AAAAAAGTTG AAAATGCAAT CGACACTATG CAAAAAATCA CAAACGTAAT TGATGAACTT
GGAAGATCAA TCCAGGAACT CGGGGAAGAA TCCAAAAAAA TCAACGAAGT TACAGTTTTG
ATTAAAGACG TTGCAGAACA GACTGGATTA CTTGCTTTGA ACGCTTCAAT TGAAGCAGCT
CGCGCTGGAG AAGCTGGAAA AGGATTTGCT GTTGTTGCAA GTGAAATCAA GTCACTCGCA
GAAGAAATTA AAAAATCCGT TGAAGATATT AATAAAACAG TACGGGGAGT TCAGGTAAGA
ATATCAAATA CTATAAAACT TGAACAAAAC GGTAAAAACG CAGTAAATGA TGGATATTAT
GCGATAAATG ATGTAAATGA TGCATTTTTA AATATTCGGG GCAGTATTAA AAATACTTCT
GATAAAATAG AAGAAATAAA AGGTTACGTT CAAGAAGTTT CTGAAAATAC ATCAAATGTT
TTGAAAAATG TCCAGGAAGT TTCAAAAATC TCCGAAGAGC TTGCATATAC CGCAGAAAAA
TTAAATGCTT CAACAGAAGA TCAAAATTCT GCAATTGGGG GCATAGATAA AGTTTCAGAG
GCGATTTCAA GAGCTTCCAA ATCCATATCT ACTAGATTAT TGCAGTTTAA AATTTAA
 
Protein sequence
MRSVNNIRTK LMLTSIIGLA LPILILTIVS NLTTENYSNY ESLEKLDLSK KSISYNLDQK 
NEEMASFLKY LSENENIKSY IIENNFNSLN IESENIKSSL GVDEVIFLDD YENAITENEL
NNNFDFKNLN SGYLLIKNGN LNQFSVIQVQ NIYKNQELVG SVVIIDYLDE NEFVNNLKDF
SNFDVSLYMN GMFVSTTLAD KAKLSHISSF FENSASESEY ESFLESGNDY LKIEDVRGNL
LGYLVISTPK STALSYLTAA RSHNLIVAFF GFVVSIVVSL ISSRNLTKPI TKLKNGAEQF
SKGVYDHNID VNTGDELEDL ADSFNKMANS IMTLNDLIDT DRKTMAKTLH ELSDFMYEMS
RGNLSVRLDE NQDKNRLQKN VNQAINNFSQ LLKSVQSEVS VLDQQTINLN KELTTTMTIS
EGVKDAADHV ASSTGEQCTK LQEISEDIKS TAKAVENVNS AVLNTTVASK EINQNSEMGV
KKVENAIDTM QKITNVIDEL GRSIQELGEE SKKINEVTVL IKDVAEQTGL LALNASIEAA
RAGEAGKGFA VVASEIKSLA EEIKKSVEDI NKTVRGVQVR ISNTIKLEQN GKNAVNDGYY
AINDVNDAFL NIRGSIKNTS DKIEEIKGYV QEVSENTSNV LKNVQEVSKI SEELAYTAEK
LNASTEDQNS AIGGIDKVSE AISRASKSIS TRLLQFKI