| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1148 |
|---|
| Symbol | |
|---|
| ID | 5328883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 1117435 |
|---|
| End bp | 1119345 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640793703 |
|---|
| Product | acetate--CoA ligase |
|---|
| Protein accession | YP_001330365 |
|---|
| Protein GI | 150403071 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase
[TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.39151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTG GAGACAAATA CATAATGCTC GAAAAATATT CGGAAATGCA GCAGAAAGCT
TTGGATGACC CTGAAAAATT CTGGGGAGAA CAGGCAAAAT GTTTAGAATG GGATAAAACC
TGGGATAAGG TATTGGACTG GAATCCTCCT TACGCAAAAT GGTTCAAAGG CGGTATTTTA
AATGCAAGTT ACAACTGTGT TGATAGACAC ATAAAAGGAA ACCGGAGAAA TAAAGCTGCT
ATAATCTGCG AAAAAGAGGA TGGGAGCTGC GGAATTTTAA CATATTATGA GTTATACCGG
GAAATAAATA AATTCGCAAA TGTTCTTGAG AATTTGGGCG TTGAAAAAGG CGATGTTGTT
ACAATCTACA TGCCGATGAT GACAGAGGCA ATTATTGCAA TGCTCGCATG TTCGAGAATT
GGGGCAATCC ACAACGTTGT ATTCTCTGGA TTTTCATCAG ATGCGCTCGC TGATCGGATA
AATGATTCAA AATCAAAAAT ATTGGTTACT ACAAACCTGT TGTACAGGCG TGGAAAAGAG
ATTGACCTTA AAAAAATACT GGATAAAGCA CTATTAAATT GTAATTCAAT AAAACACGTA
GTTTATGCAA AAAGAGGCAG TGAAGAATTT AATTTAGTTT CCGGAAAAGA GTACTTCTGG
GATGAATTGA TGGGCGGAGC TAAAAGCTAC GTAGAACCGG TTCCTGTAGA GTCAGAGCAC
CCACTATTTA TTCTTTACAC GAGCGGTACA ACAGGAAGTC CAAAAGGGGT AGTTCACTCA
ACAGGGGGAT ATTTAACTTA CGCTACGAAA ACCATGGATT GGACATGGGG ATTAAATGAA
ATGGATGTAT TTTGGTGTAC TGCAGATATT GGCTGGATTA CCGGCCACAC GTATGTGGTT
TATGGGCCGC TATCACTTGG TGCTACGATA GTTCTTTACG AAGGTGCGAT AGATTACCCT
GAACCTGACA GATTGTGGGG TATTGTAGAA AATCACGGAG TTACATTACT CTACACTGCA
CCAACCGCGA TAAGAATGCT CATGATGTAC GGTGAAAAAT GGGTAAATAC TCACGATTTA
TCAACACTGA GACTTTTGGG AAGCGTTGGT GAGCCGATAA ACCCAAGAGC TTGGAAATGG
TACTATAAAG TAATTGGAAA AGAAAAATGC CCAATATGTG ACTGCTACTG GCAAACAGAA
ACAGGGGGAC ACATGATATA CCCTGCAATT GGACTCCAGT CAGTCCCATT AAAACCAGGT
TCTGCAACGT TCCCAGGAAT TGGAATTGAC GTTGATGTTG TAGATAACGA AGGAAATCCA
GTTGATGCAA ATGTAAAAGG AAATCTTATC ATAAAAAAGC CATGGCCAGG AATGCTTGCA
GGGCTGTGGA ATAATGATGA AAGGTACCGT GCAGCATATT GGGATAGGTT CAAAAACAAA
TTCTCAACAT CTGACTATGC AATAAGAGAT CAGGATGGAT ATATATGGGT ACTGGGACGA
TCTGACGAAG TATTGAATGT TTCAGGACAC AGAATCGGAA CTGCGGAACT CGAACACGAA
CTTGTATCGA ATAAAATGGT TGCAGAGTCT GCAGTAGTTG GAAAACCTGA TGACGTGAAA
GGAGAGGTTC CTGTTGCATT TGTGATATTA AACGAAAAAT ACCGGGAACT TCCATCAAAT
GAAGTAAAAG CTACACTTAT AAGGCATATC CGGGATACTG TTGGTCCAAT TGGAACTCCA
GCAATGATAT TCTTCGTAAA TAAACTTCCA AAAACAAGAA GTGGAAAGAT AATGAGAAGA
ATCTTGAAAA AACTTATAAT GGGCGAAGAT ATAGGGGATG TTAGCACTTT GGAAGACAAT
ACCAGTCTAG AAGAAGTTAA AAAAGAGCTT GAAGATTTCA AGTACGATTA A
|
|---|
| Protein sequence | MKTGDKYIML EKYSEMQQKA LDDPEKFWGE QAKCLEWDKT WDKVLDWNPP YAKWFKGGIL
NASYNCVDRH IKGNRRNKAA IICEKEDGSC GILTYYELYR EINKFANVLE NLGVEKGDVV
TIYMPMMTEA IIAMLACSRI GAIHNVVFSG FSSDALADRI NDSKSKILVT TNLLYRRGKE
IDLKKILDKA LLNCNSIKHV VYAKRGSEEF NLVSGKEYFW DELMGGAKSY VEPVPVESEH
PLFILYTSGT TGSPKGVVHS TGGYLTYATK TMDWTWGLNE MDVFWCTADI GWITGHTYVV
YGPLSLGATI VLYEGAIDYP EPDRLWGIVE NHGVTLLYTA PTAIRMLMMY GEKWVNTHDL
STLRLLGSVG EPINPRAWKW YYKVIGKEKC PICDCYWQTE TGGHMIYPAI GLQSVPLKPG
SATFPGIGID VDVVDNEGNP VDANVKGNLI IKKPWPGMLA GLWNNDERYR AAYWDRFKNK
FSTSDYAIRD QDGYIWVLGR SDEVLNVSGH RIGTAELEHE LVSNKMVAES AVVGKPDDVK
GEVPVAFVIL NEKYRELPSN EVKATLIRHI RDTVGPIGTP AMIFFVNKLP KTRSGKIMRR
ILKKLIMGED IGDVSTLEDN TSLEEVKKEL EDFKYD
|
|---|
| |