Gene MmarC7_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1144 
Symbol 
ID5328743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1113634 
End bp1114242 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content32% 
IMG OID640793699 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_001330361 
Protein GI150403067 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACATAA TTCCTTCAAA AATAGTGTGT GCTGGATTAA ATTACAAAGA CCATGCCAAA 
GAACTTAAAA TGGAGTTGCC AAAAGAGCCA GTCATATTTT TAAAACCCAC TTCTTCGATA
ATATTTAACG AAGAAGCAAT AAAAATACCA AAAGCATCTA AAAGAGTTGA TTACGAAGCT
GAACTTGCAA TTGTAATTGG AAAAACCTGT AAATCTGTAA AAAAAGAAGA TGCTAAAAAC
TACATAAAAG GATTTACAAT TTTAAATGAT GTTACTGCAA GAGACATTCA GGAAAAAGAT
GGGCAGTGGA CAAGAGCCAA ATCCTTCGAT ACGTTTTGTC CAATTGGTCC AAAAATAGTA
TCTGGAATAG ATGCAAACAA CTTAAAAATC CAGTTAAGAG TTAATGGAAA AATAAAACAG
GATTCTAACA CCAATAATAT GATATTTGAT GTCGAAGAAC TTGTTGAATT TGTTTCATCG
GTAATGACAC TTTATCCGGA TGACATTATT TCGACAGGAA CTCCGCCAGG AGTTGGAAAA
CTTGAAAAAG GAGATACTGT CGAAATTGAA ATTGAAAACA TTGGAATTTT GAAAAATTTC
GTTGAATAA
 
Protein sequence
MDIIPSKIVC AGLNYKDHAK ELKMELPKEP VIFLKPTSSI IFNEEAIKIP KASKRVDYEA 
ELAIVIGKTC KSVKKEDAKN YIKGFTILND VTARDIQEKD GQWTRAKSFD TFCPIGPKIV
SGIDANNLKI QLRVNGKIKQ DSNTNNMIFD VEELVEFVSS VMTLYPDDII STGTPPGVGK
LEKGDTVEIE IENIGILKNF VE