Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1144 |
Symbol | |
ID | 5328743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1113634 |
End bp | 1114242 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640793699 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_001330361 |
Protein GI | 150403067 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGACATAA TTCCTTCAAA AATAGTGTGT GCTGGATTAA ATTACAAAGA CCATGCCAAA GAACTTAAAA TGGAGTTGCC AAAAGAGCCA GTCATATTTT TAAAACCCAC TTCTTCGATA ATATTTAACG AAGAAGCAAT AAAAATACCA AAAGCATCTA AAAGAGTTGA TTACGAAGCT GAACTTGCAA TTGTAATTGG AAAAACCTGT AAATCTGTAA AAAAAGAAGA TGCTAAAAAC TACATAAAAG GATTTACAAT TTTAAATGAT GTTACTGCAA GAGACATTCA GGAAAAAGAT GGGCAGTGGA CAAGAGCCAA ATCCTTCGAT ACGTTTTGTC CAATTGGTCC AAAAATAGTA TCTGGAATAG ATGCAAACAA CTTAAAAATC CAGTTAAGAG TTAATGGAAA AATAAAACAG GATTCTAACA CCAATAATAT GATATTTGAT GTCGAAGAAC TTGTTGAATT TGTTTCATCG GTAATGACAC TTTATCCGGA TGACATTATT TCGACAGGAA CTCCGCCAGG AGTTGGAAAA CTTGAAAAAG GAGATACTGT CGAAATTGAA ATTGAAAACA TTGGAATTTT GAAAAATTTC GTTGAATAA
|
Protein sequence | MDIIPSKIVC AGLNYKDHAK ELKMELPKEP VIFLKPTSSI IFNEEAIKIP KASKRVDYEA ELAIVIGKTC KSVKKEDAKN YIKGFTILND VTARDIQEKD GQWTRAKSFD TFCPIGPKIV SGIDANNLKI QLRVNGKIKQ DSNTNNMIFD VEELVEFVSS VMTLYPDDII STGTPPGVGK LEKGDTVEIE IENIGILKNF VE
|
| |