Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1038 |
Symbol | tfb |
ID | 5328939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1014364 |
End bp | 1015383 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640793583 |
Product | transcription initiation factor IIB |
Protein accession | YP_001330255 |
Protein GI | 150402961 |
COG category | [K] Transcription |
COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.20206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCG AATCTGTTAC AAAAGAAGAA ACTAAAAAGC CTGAAAGAAA GATTAAACTA GCTATCGCAA AGCCTGAAGA CTATTCAAAT AAGAATGTAA TTTTAGAAAA GGAAGAAGAA TTAATTTGTC CTGTCTGCGG TAGTAAAAAT ATTATTAAAG ACTATGAAAG GGCTGAAATT GTTTGTGAAA TGTGTGGGTG TGTTTTACAA CAAAATTTAT TCGATGTAGG TCCTGAATGG AGAGCTTTCG ACCACGAACA GCGTGTGAAA AGAAGCAGAG TAGGGGCCCC AATGACATAT ACAATCCACG ATAAAGGTTT ATCAACCGTT ATCGACTGGA GAAATAAAGA TAGCTACGGA AAAGATATTT CTGCAGATAA AAGAGCTCAA TTGTACAGAT TAAGAAAATG GCAGAGAAGG ATTAGGGTTT CTGATGCATC TGAAAGAAAT TTAGCATTTG CTCTTTCTGA ACTTGATAGA ATCGCATCAA AATTGGGCCT TCCAAGAAAC GTTAGAGAAA ATGCCGCAGT TCTCTACAGG GGCGCTGTAG AAAAAGGGCT GATCAGAGGA AGAAGTATTG AAGGTGTTGC TGCTGCTGCA CTTTACGCTG CTTGTAGAAG ATGTAAAGTT CCAAGAACTC TAGATGAGAT TGCAGAAGTC TCGAGAGTAG ATAGAAAAGA AATCGGAAGG ACTTATAGAT TTATTTCAAG AGAATTAAAT ATCAGGCTTG CTCCAACAAA TCCCGTAGAT TACGTTCCCA GATTTGCTTC AGAATTAAAA CTTCCAGGTG AAGTAGAATC AAAAGCAATA TCAATACTTC AGAAAGCAGG GGAAAAGGGT CTTACCAGCG GTAGGGGTCC TACAGGGGTT GCCGCTGCTG CAATTTATAT TGCAAGTGTT TTACAAGGAA CTAGAAGAAC CCAAAGAGAA GTTGCGGACG TTGCAGGCGT TACTGAAGTT ACAATTAGAA ACAGATACAA AGAGTTAACA GAACATTTAG ATATCGATGT AACATTGTAA
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Protein sequence | MKVESVTKEE TKKPERKIKL AIAKPEDYSN KNVILEKEEE LICPVCGSKN IIKDYERAEI VCEMCGCVLQ QNLFDVGPEW RAFDHEQRVK RSRVGAPMTY TIHDKGLSTV IDWRNKDSYG KDISADKRAQ LYRLRKWQRR IRVSDASERN LAFALSELDR IASKLGLPRN VRENAAVLYR GAVEKGLIRG RSIEGVAAAA LYAACRRCKV PRTLDEIAEV SRVDRKEIGR TYRFISRELN IRLAPTNPVD YVPRFASELK LPGEVESKAI SILQKAGEKG LTSGRGPTGV AAAAIYIASV LQGTRRTQRE VADVAGVTEV TIRNRYKELT EHLDIDVTL
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