| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_1037 |
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| Symbol | |
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| ID | 5328875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C7 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009637 |
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| Strand | - |
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| Start bp | 1012696 |
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| End bp | 1014354 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640793582 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001330254 |
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| Protein GI | 150402960 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0840117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTTT TTGACAGAAT TCAGACTAAA GATTCCAAAC CCGCCATCGC TAAAAAAACT
AATGTTTCTG AAAATGTGTC TAAACCCTCA AATCTATTTG ATAAATCTGA AGATATCGAA
AAAGAAAAAC CAGAGATTAA AGTTGGATTT TCAGTAACTG ATAAGGTAAA AAAACAGCCT
GTTGAAAATT TTAATAGGGA CTCTAAGGGA TCCATAATTG ATAAATACTT TGTAAAAGTT
GATGATATCG ATTTTGATGT GATTATCGAA AAAGAAGATG GAATTACGAA ATACAAAATC
CCGGAAATCA CCCTAATGAA CACAGCGCTT GCAAAACTTT CAGATTTAGA TATTAAAACA
ATAAAAGCGG AACTTTCAGA ATCAACCCTT CAAAAATTAG GTCAGATTCA AGGGTATCTT
AAAAACTATT CGGACAAAAA TAACTTACAC TTAAGAGATA TTGAAATACT CCACTTATCG
CATTATTTTT ATTTAATAAT TGGAAAATTA GGACTTTTAG AAATTCCATT GAATGACGGT
AACTTGGAAG AAGTAATGGT AAATGGGATT GAATTACCTG TATTTGTATT CCACAGAAAA
TATCAGATGT GTGAAACGAA TATTCGACTT GATAGGCATG AAGCGACAAG GGTTGTTGAA
AGTATTGCAT ATCTTGCAGG AAGAAGTATT GATTCGAGAA CTCCAATGCT AGATGCATTT
TTACCTGATG GAAGCAGGGT TAATGCCACC ATGGGTGATG TTACTTTAAG AGGAAATACC
ATTACAATCC GTAAATTCAG TGAAGACCCG TTAACCATTG TTGATTTGAT TAATTATGGA
ACTTTCGATC TAGAACTTGC CGCATTTCTT TGGCAGGCTG TCGAAGGATA CTTTGGTGCA
AAACCTGCAA ACACCCTTAT TGTTGGGGGA ACGGGTTCGG GTAAAACAAC GACTTTAAAC
GTAGTTTCTA TGTTTTCAAT GTATACTGAC AGGATTGTAA CTATCGAAGA TACTCCAGAG
TTGCAGGTTC CACTAACACA CCTGATAAAA ATGATTACAA GACCGGGAAG GCCAGGAGTT
CAGGGTTATG AAATCACGAT GGATGATTTA ATTAAGAACT CTTTAAGGAT GAGACCAGAT
AGGATCTTTG TAGGGGAAGT TAGGGGTAGT GAAGCCCATT CATTACTTGT TGCAATGAAC
ACAGGACACG ATGGATGTTC TGGAACTCTG CACGCAAACA GCGCTGATGA AGCAATTATA
AGGTTAGTAA ACCCTCCAAT GAACGTTCCA AAAGTTATGA TGTCGTCTAT TGATTTTATC
ATAAACCAGC AGCGTATCAA ACGTAATAAA AAAACTGTTA GAAGGATCCT CGGTGTTGTC
GAAATCGGTG GAAGCGGGGA AAATATTACA AAAACCGAAC TTTTCAAATA CGATGGTATA
AGCGACAGTG TTGTAAAAAC GGGAATCTGT ATGTGGGAAG AAGATGCTTG CCAGATTGCA
GGTATTACTC GAGACGAATT AATGGACGAT AGAATCAATA GAAAGAAAGT ACTAAAATAT
ATGGTGAACA ATAATATTAG TGATATTAGA AAAGTTGGCG ACATAATTAA ACAATATCAG
GAAAATCCAG AAAATGTTTT AAAACATATA CTGGAATGA
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| Protein sequence | MGLFDRIQTK DSKPAIAKKT NVSENVSKPS NLFDKSEDIE KEKPEIKVGF SVTDKVKKQP
VENFNRDSKG SIIDKYFVKV DDIDFDVIIE KEDGITKYKI PEITLMNTAL AKLSDLDIKT
IKAELSESTL QKLGQIQGYL KNYSDKNNLH LRDIEILHLS HYFYLIIGKL GLLEIPLNDG
NLEEVMVNGI ELPVFVFHRK YQMCETNIRL DRHEATRVVE SIAYLAGRSI DSRTPMLDAF
LPDGSRVNAT MGDVTLRGNT ITIRKFSEDP LTIVDLINYG TFDLELAAFL WQAVEGYFGA
KPANTLIVGG TGSGKTTTLN VVSMFSMYTD RIVTIEDTPE LQVPLTHLIK MITRPGRPGV
QGYEITMDDL IKNSLRMRPD RIFVGEVRGS EAHSLLVAMN TGHDGCSGTL HANSADEAII
RLVNPPMNVP KVMMSSIDFI INQQRIKRNK KTVRRILGVV EIGGSGENIT KTELFKYDGI
SDSVVKTGIC MWEEDACQIA GITRDELMDD RINRKKVLKY MVNNNISDIR KVGDIIKQYQ
ENPENVLKHI LE
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