Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0864 |
Symbol | aspC |
ID | 5329375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 832878 |
End bp | 834194 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640793394 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001330082 |
Protein GI | 150402788 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.321386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00505201 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTATTTAA TAGCAGATTG GAGAAGAACA CACTACTCAG AAGAAGTAAT TCCTGAAATG GACGGTCAGG AAGTTATTTT GATGGGATGG GTTCACTCAA TAAGGGCTTT AGGAAAACTC GCATTTGTAA TTTTGAGAGA CAGGGAAGGA ACAATTCAAG CAGTAGTTCC AAAACAGAAA GTCGACGAAG AAACATTTGA GATTGCAAAA AAATTAGGAA AAGAAGATAT AATTGCAATC AGGGGAAAAG TAGTTGCAAA CGAAAAAGCT CCAAAAGGAT TTGAAGTAAT TCCTATTGAA ATAAGAGTAC TTAACAAGGC CGATGCACCG CTTCCACTCG ATCCTTCAGA AAAAGTTCCT GCAGAAATCG ATACAAGACT CGACAAAAGG TTCTTAGATA TCAGAAGACC TAAAATTCAG GCAATATTTA AAATAAGATC TGAAATGTTA AGATCAATCA GAAAAACGTT TGCAGACGAA GGATTTGTCG AAGTAAACAC TCCAAAATTA GTTGCAAGTG CGACAGAAGG TGGAACTGAA TTATTCCCTA TTTCATACTT TGAAAAAGAG GCATTTTTAG GCCAAAGCCC ACAGCTTTAC AAACAGATGA TGATGGCTGG TGGATTTGAC AAAGTGTTCG AAATTGCACA GATTTTCAGG GCAGAAGAAC ACAACACCAG AAGACACTTA AACGAAGCAG TTTCAATCGA TACAGAAATG TCATTCGTAA ACGAAAAAGA TGCTATGGCA ATGCTTGAAA AAGTAGTTTA CAACTGTTAC GCAGATATTG AATACAACAG ACCTCAGGAA ATTGAACTCT TAGAATTAAA CTGGGAAATT CCTGAAAAAA CATTTGACAA ATTAACCTAC ACCGAAGCAA TCGATATTGC AATTTCAAAA GGCGTAGAAA TTGAATGGGG AGAAGATTTA TCAAGAGCTG CTGAAAGAGC AGTTGGTGAC GAAATGGGTG GCCTTTACTT TATTACTGAA TGGCCAACAC AGACAAGACC ATTTTACACA CTCCCACATG AAAACGACAA TAAAGTCTGT AAAGCATTTG ATTTGATGTA CAAAGAGCTT GAAATATCTT CAGGAGCTCA GAGGGTTCAC AAATACGACC TTTTAGTTGA AAATATTTCA AATATGGGTA TGAATCCAGA TTCATTTGAG ACGTACCTTG AAGCATTCAA ATTTGGAATG CCCCCACACG CAGGATGGGG ACTTGGTGCT GACAGGTTTG CAATGGTTTT GACCGCACAG GACAACATCA GAGAATGTGT ATTATTCCCA AGAGACAGGC AGAGATTAAC TCCATAA
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Protein sequence | MYLIADWRRT HYSEEVIPEM DGQEVILMGW VHSIRALGKL AFVILRDREG TIQAVVPKQK VDEETFEIAK KLGKEDIIAI RGKVVANEKA PKGFEVIPIE IRVLNKADAP LPLDPSEKVP AEIDTRLDKR FLDIRRPKIQ AIFKIRSEML RSIRKTFADE GFVEVNTPKL VASATEGGTE LFPISYFEKE AFLGQSPQLY KQMMMAGGFD KVFEIAQIFR AEEHNTRRHL NEAVSIDTEM SFVNEKDAMA MLEKVVYNCY ADIEYNRPQE IELLELNWEI PEKTFDKLTY TEAIDIAISK GVEIEWGEDL SRAAERAVGD EMGGLYFITE WPTQTRPFYT LPHENDNKVC KAFDLMYKEL EISSGAQRVH KYDLLVENIS NMGMNPDSFE TYLEAFKFGM PPHAGWGLGA DRFAMVLTAQ DNIRECVLFP RDRQRLTP
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