Gene MmarC7_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0683 
Symbol 
ID5329639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp677511 
End bp678782 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content37% 
IMG OID640793208 
ProductSCP-like extracellular 
Protein accessionYP_001329901 
Protein GI150402607 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGC CGTTTAAAGT TTTTACATTA ACGATAATTA CACTATCCTT ATTGACAGCT 
ACCTGTGCAA ATTCTAGCTT CGATGGATGT GAACAAACTT TTTCAAACCT AACTTACCAA
AATTTTAACG AAAATTACCA TAATTTATTT GATAACAACC AAAATCTATT CTTAGAATTA
AACAGCTTTT TTAAAAATAA TGAGGAGTAT AAAACTTTTG AAGTTAAAGC ATATGCCCCT
CTGAAAAAAA CGTCTTCAAA ATCACAAATA CTTGAATCAC GATACGTTCC TTCAAGTGAT
ACGGATAGTT CATCTGAAGA TACTACGGAT AGTTCATCTG AAGATACTAC GGATAGTTCA
TCTGAAGATA CTACGGATAG TTCATCTGAA GATACTACGG ATAGTTCATC TGAAGATACT
ACGGATAGTT CATCTGAAGA TACTACGGAT AGTTCATCTG AAGATACTAC GGATAGTTCA
TCTGAAGATA CTACGGATAG TTCATCTGAA GATACTACGG ATAGTTCATC TGAAGATACT
ACGGATAGTT CATCTGAAGA TAATACATAC TTGCCTTCAA AAATAACCCA ATCTTCAAAA
ACATCATTGT ATATCATCAA AAAAACTAGC TATTACAGTG ATGCTACAGA AGAACCAGTG
GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGAAGAAC CAGTGGTAGA AGAACCAGTG
GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGAAGAAC CAGTGGTAGA AGAACCAGTG
GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGATAAAA ACTCATTAAT TGAACAGTAT
ATATTAGAAT ACACCAATAT GGAACGCTCT TCATACGGAC TCGATGAGTT AATATTGGAT
AGTAAATTAA GCCAAATTTC ACAAGCCCAC AGTGATGATA TGGTAGAAAA CAATTACTTT
TCCCATACAA ACTTAGATGG TGAAACCCCT ACAGATAGGG CAATTGCTGC TGGCTACAAT
GTTGTAAAAT ATCTCGGAGA CGGGTATTAC TCAACAGGAA TTGGCGAAAA TATTGCAAAA
ATGCCTACCG GTAACGTACT TGGAATTGGA TACGTTTCAG ATGATGCTGA AAGTATTGCA
GAAGCGATCG TGGATGCTTG GATGGACAGT CCTGGCCACC GGGCAAATAT TCTGAATTCC
CAATACACCA ACATGGGTAT CGGCGTATCT TTTGACGGTA CGTATTATGT TGCAACCCAA
AATTTCTATT AA
 
Protein sequence
MDWPFKVFTL TIITLSLLTA TCANSSFDGC EQTFSNLTYQ NFNENYHNLF DNNQNLFLEL 
NSFFKNNEEY KTFEVKAYAP LKKTSSKSQI LESRYVPSSD TDSSSEDTTD SSSEDTTDSS
SEDTTDSSSE DTTDSSSEDT TDSSSEDTTD SSSEDTTDSS SEDTTDSSSE DTTDSSSEDT
TDSSSEDNTY LPSKITQSSK TSLYIIKKTS YYSDATEEPV VEEPVVEEPV VEEPVVEEPV
VEEPVVEEPV VEEPVVEEPV VEEPVVEEPV VDKNSLIEQY ILEYTNMERS SYGLDELILD
SKLSQISQAH SDDMVENNYF SHTNLDGETP TDRAIAAGYN VVKYLGDGYY STGIGENIAK
MPTGNVLGIG YVSDDAESIA EAIVDAWMDS PGHRANILNS QYTNMGIGVS FDGTYYVATQ
NFY