Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0683 |
Symbol | |
ID | 5329639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 677511 |
End bp | 678782 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640793208 |
Product | SCP-like extracellular |
Protein accession | YP_001329901 |
Protein GI | 150402607 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTGGC CGTTTAAAGT TTTTACATTA ACGATAATTA CACTATCCTT ATTGACAGCT ACCTGTGCAA ATTCTAGCTT CGATGGATGT GAACAAACTT TTTCAAACCT AACTTACCAA AATTTTAACG AAAATTACCA TAATTTATTT GATAACAACC AAAATCTATT CTTAGAATTA AACAGCTTTT TTAAAAATAA TGAGGAGTAT AAAACTTTTG AAGTTAAAGC ATATGCCCCT CTGAAAAAAA CGTCTTCAAA ATCACAAATA CTTGAATCAC GATACGTTCC TTCAAGTGAT ACGGATAGTT CATCTGAAGA TACTACGGAT AGTTCATCTG AAGATACTAC GGATAGTTCA TCTGAAGATA CTACGGATAG TTCATCTGAA GATACTACGG ATAGTTCATC TGAAGATACT ACGGATAGTT CATCTGAAGA TACTACGGAT AGTTCATCTG AAGATACTAC GGATAGTTCA TCTGAAGATA CTACGGATAG TTCATCTGAA GATACTACGG ATAGTTCATC TGAAGATACT ACGGATAGTT CATCTGAAGA TAATACATAC TTGCCTTCAA AAATAACCCA ATCTTCAAAA ACATCATTGT ATATCATCAA AAAAACTAGC TATTACAGTG ATGCTACAGA AGAACCAGTG GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGAAGAAC CAGTGGTAGA AGAACCAGTG GTAGATAAAA ACTCATTAAT TGAACAGTAT ATATTAGAAT ACACCAATAT GGAACGCTCT TCATACGGAC TCGATGAGTT AATATTGGAT AGTAAATTAA GCCAAATTTC ACAAGCCCAC AGTGATGATA TGGTAGAAAA CAATTACTTT TCCCATACAA ACTTAGATGG TGAAACCCCT ACAGATAGGG CAATTGCTGC TGGCTACAAT GTTGTAAAAT ATCTCGGAGA CGGGTATTAC TCAACAGGAA TTGGCGAAAA TATTGCAAAA ATGCCTACCG GTAACGTACT TGGAATTGGA TACGTTTCAG ATGATGCTGA AAGTATTGCA GAAGCGATCG TGGATGCTTG GATGGACAGT CCTGGCCACC GGGCAAATAT TCTGAATTCC CAATACACCA ACATGGGTAT CGGCGTATCT TTTGACGGTA CGTATTATGT TGCAACCCAA AATTTCTATT AA
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Protein sequence | MDWPFKVFTL TIITLSLLTA TCANSSFDGC EQTFSNLTYQ NFNENYHNLF DNNQNLFLEL NSFFKNNEEY KTFEVKAYAP LKKTSSKSQI LESRYVPSSD TDSSSEDTTD SSSEDTTDSS SEDTTDSSSE DTTDSSSEDT TDSSSEDTTD SSSEDTTDSS SEDTTDSSSE DTTDSSSEDT TDSSSEDNTY LPSKITQSSK TSLYIIKKTS YYSDATEEPV VEEPVVEEPV VEEPVVEEPV VEEPVVEEPV VEEPVVEEPV VEEPVVEEPV VDKNSLIEQY ILEYTNMERS SYGLDELILD SKLSQISQAH SDDMVENNYF SHTNLDGETP TDRAIAAGYN VVKYLGDGYY STGIGENIAK MPTGNVLGIG YVSDDAESIA EAIVDAWMDS PGHRANILNS QYTNMGIGVS FDGTYYVATQ NFY
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