| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0612 |
|---|
| Symbol | rps12P |
|---|
| ID | 5328509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 616094 |
|---|
| End bp | 616537 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640793137 |
|---|
| Product | 30S ribosomal protein S12P |
|---|
| Protein accession | YP_001329830 |
|---|
| Protein GI | 150402536 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00982] ribosomal protein S23 (S12) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAA GTAAATCTCC AAAAGGAGAA TTCGCAGGAA GAAAATTACT TTTGAAAAGA
AGAGCAAGCA GATGGCACCA CTACAAATAC GTGAACAAAG CATTAAGCTT AAAATTAAAA
GCTGACCCAT TAGAAGGTGC TCCAATGGGA AGAGGAATTG TTGTTGAGAA AGTAGGTCTC
GAAGCAAAAC AACCAAACTC TGCTATCAGA AAATGTGTTA GAGTTCAGTT AATCAAAAAC
GGTAGACAAG TTACCGCATT TGCACCTGGA AACCACGCTA TCAACTTCAT TGATGAACAC
GACGAAGTTG TTATCGAAGG TATCGGTGGT CCATCAGGAC AGGCTAAAGG GGATATCCCT
GGAGTTAGGT ACAAAGTTGT TATGGTTGGT AAAAACTCAA TCAGAGAGCT TGTCAGAGGA
AGACAGGAAA AAGTTAAAAG ATAA
|
|---|
| Protein sequence | MAGSKSPKGE FAGRKLLLKR RASRWHHYKY VNKALSLKLK ADPLEGAPMG RGIVVEKVGL
EAKQPNSAIR KCVRVQLIKN GRQVTAFAPG NHAINFIDEH DEVVIEGIGG PSGQAKGDIP
GVRYKVVMVG KNSIRELVRG RQEKVKR
|
|---|
| |