| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0517 |
|---|
| Symbol | |
|---|
| ID | 5328705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 524338 |
|---|
| End bp | 525777 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640793037 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase |
|---|
| Protein accession | YP_001329736 |
|---|
| Protein GI | 150402442 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.214699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA TTACGGAAAA AATTATGAAA AAGCCAAATG CAATGCCTGA AGTTTTTGAA
AGAAAGGGAG GTTCTGCACC AACTGCAACG CACTACTGTG CAGGTTGTGG ACACGGAATA
ATCCATAAAT TAATGGCAGA GGCAATTGAT GAACTTGAAA TTGTCGATAG ATGCGTTTTA
ATCAGCCCTG TTGGATGTGC AGTATTTGCA TACTATTATT TTGACTGCGG AAATATCCAA
GTGGCTCACG GAAGAGCTCC AGCTGTTGGA ACTGGTGTTT CAAGAGCAGA AGGCAATGCA
ATTGTAATGT CATACCAAGG AGATGGGGAT TTGGCATCAA TTGGATTGAA TGAAACAATT
CAGGCAGCAA ACCGTGGAGA AAAAATGGCA GTATTTTTCG TAAATAACAC AGTTTACGGA
ATGACTGGTG GCCAGATGGC TCCAACAACA CTTATTGGTG AAAAAACTGT AACCTGTCAA
ACTGGAAGGG ATCCAAGGTT TGCAGGATAC CCAATTCACA TGTGCGAACT TTTAAGCAGC
TTAAAAGCTC CAGTATTTAT TGAAAGAGTT TCAGTTTCAG ATATTGCACA CATAAGAAAG
GCAAAACGTG CTATCAAAAA GGCTCTTGAA ATTCAAAGAG ATGGAAAAGG ATATGCATTT
GTTGAAATAT TATCACCCTG CCCAACGAAC TTGAAACAGG ATGCAAAAGC TGCTGAAAAA
TTCATAAACG AAGAAATGGA AAAAGAATTC CCACTACAAA ACTTCAGAGA CAGAAGCGCT
GAAGTTGAAA CATTGGATCG TGGAGAAAGT GACTTTTCAA AAGAATGTCT TGACAAAATA
TTTGAAGTAA ATTCAAAAGG TTCAGAGGAT CCATCAGAAG ACCTTTCTTT CGAAGAAAAA
CTTGTAAAAA TTGCAGGATT TGGTGGACAG GGAGTTTTAA GTATGGGTTT GACGCTTGCA
GAAGCAGCAT GCAGGGACCA AAAGTACGTT TCATGGTACC CGTCATACGG CCCAGAACAA
AGAGGTGGAA CCTCAAACTG TTCCGTTATA ATTTCGGGAC ACGAAATTGG ATCTCCTGTA
GTATACTCCC CAGGAGTTTT AATTGCTTTA AACAAACCAT CGCTTGAAAA CTTTGCAAAA
GACGTGAAAG TTGGCGGAAC AATAATTTAT GATGAAAATA TTGGGGATTT TGAAATTCCA
AATGGGGTTA CTGCAATAAA AGTTCCAGCT TCAAAAATCG CAACTGAAAT GGGCGTTTCA
AGAGCGGCAA ATACTGTAAT GCTTGGAGTT TTATCTGCAA TTGGCTACAC TGGACTTTCT
GAATCGGTAT TTGTTGGTGC AATAGAACAA ACTTTCTCAA AAAAACCTAA ATTAATTCCT
ATAAACGTTG AAATATTAAA TGCAGGAATT TCATGGGCTA AAGAAAATTT AGCTTTATAA
|
|---|
| Protein sequence | MTEITEKIMK KPNAMPEVFE RKGGSAPTAT HYCAGCGHGI IHKLMAEAID ELEIVDRCVL
ISPVGCAVFA YYYFDCGNIQ VAHGRAPAVG TGVSRAEGNA IVMSYQGDGD LASIGLNETI
QAANRGEKMA VFFVNNTVYG MTGGQMAPTT LIGEKTVTCQ TGRDPRFAGY PIHMCELLSS
LKAPVFIERV SVSDIAHIRK AKRAIKKALE IQRDGKGYAF VEILSPCPTN LKQDAKAAEK
FINEEMEKEF PLQNFRDRSA EVETLDRGES DFSKECLDKI FEVNSKGSED PSEDLSFEEK
LVKIAGFGGQ GVLSMGLTLA EAACRDQKYV SWYPSYGPEQ RGGTSNCSVI ISGHEIGSPV
VYSPGVLIAL NKPSLENFAK DVKVGGTIIY DENIGDFEIP NGVTAIKVPA SKIATEMGVS
RAANTVMLGV LSAIGYTGLS ESVFVGAIEQ TFSKKPKLIP INVEILNAGI SWAKENLAL
|
|---|
| |