| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0450 |
|---|
| Symbol | cbiD |
|---|
| ID | 5328998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | - |
|---|
| Start bp | 458298 |
|---|
| End bp | 459398 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640792971 |
|---|
| Product | cobalt-precorrin-6A synthase |
|---|
| Protein accession | YP_001329670 |
|---|
| Protein GI | 150402376 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
|---|
| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.350149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGA TTGATTTTAG ACTCGAAAAA ACTTTTGGGT ATACCACAGG CGCATGTGCT
GCTGCTGGAG CATATTCTGC ACTCTATTTT TTAAAAAATA ATGAAAGATT AAATTTTGTT
GAAATTGTAA ATTTAAAAGA AGATTCCTTA ATTATTCCAA TTAAAAACAT TGAAAAACAG
GGAGACACTG CAATTTCAAC GGTAGAAAAA TTTTCAGGGG AGGACATCGA TATTACAAAT
GGAATGGATA TCGAAATAGA AGTTACTCTT AATTTGGATA ACAACAGTTC AGAATCGAGT
AATGTCGATA TTATCGGGGG AATCGGTGTT GGAATAATTA CAAAATCTGG TTTACAGGTA
ACGCTTGGAA AACCTGCAAT AAATCCAAAA CCAAGAGAAA TGATTGAAAC TAATTTAAAA
TCTCTTTTAA CTGATAATGA ATGTGTAACT GTAAAAATTT CAGTTCCAAA TGGGGATGAA
ATTGCCAAAA AAACATTAAA TCCTAAACTT GGGATAATTG GCGGAATTTC GATTCTTGGA
ACTACTGGAA TCGTTCGGCC AATGTCAAAT GACGCGTACA AAGAATCACT CGCGCCACAA
ATTGATGTAG CTTTAGCAAA TAATTTTGAA AACCTAATAT TTGTTCCAGG AAACATTGGA
ACAAAGCATG CTAAAATATT ATTACATGCA GAAGAAGATC AAATTATTGA AGTTTCAAAT
TTTTGGGACT ACATGCTCAA TAAGGCAAAA GAAAAAGGTG TTAAAGATAT AACTGTCTTT
GGACACGCTG GAAAAATCGT AAAGCTTGCT GGCGGAATTT TTGACACCCA TTCAAAAGTC
GCAGATGCAA GAAACGAAAT ACTCTGTGCT TATACTTCAT TAGTAACACA GGATGTAGAA
ATACTTCAAA AAATACTTCA ATCAAATACA ACTGAAGATA TAGTTGAAAT TTTGACTGAA
AAAGGTATTT TAAAAGAAGT TTTTGACAAT GTTTCAAAAA GAGTTGTCGA AAGACTTTCT
TCAAGATGGG ATGGAATTAA TTTTTCCTGT ATTATAATCA ATATGAAAGG AAATATGCTT
GGAAAATATG ATCAGGGTTG A
|
|---|
| Protein sequence | MGKIDFRLEK TFGYTTGACA AAGAYSALYF LKNNERLNFV EIVNLKEDSL IIPIKNIEKQ
GDTAISTVEK FSGEDIDITN GMDIEIEVTL NLDNNSSESS NVDIIGGIGV GIITKSGLQV
TLGKPAINPK PREMIETNLK SLLTDNECVT VKISVPNGDE IAKKTLNPKL GIIGGISILG
TTGIVRPMSN DAYKESLAPQ IDVALANNFE NLIFVPGNIG TKHAKILLHA EEDQIIEVSN
FWDYMLNKAK EKGVKDITVF GHAGKIVKLA GGIFDTHSKV ADARNEILCA YTSLVTQDVE
ILQKILQSNT TEDIVEILTE KGILKEVFDN VSKRVVERLS SRWDGINFSC IIINMKGNML
GKYDQG
|
|---|
| |