Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0193 |
Symbol | gatB |
ID | 5328909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 203655 |
End bp | 205064 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640792714 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_001329414 |
Protein GI | 150402120 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.170237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAG ATCTATCGAT GAAATGCGGT CTTGAAATTC ACGTGCAGGT AGACACAAAT TCTAAATTAT TCTGCCAGTG CCCTACAAAT TATAAGGATG TTGAACCAAA CACGAACATC TGCCCGGTAT GTATTGGACA CCCGGGTGCA AAACCAATGC CTCCAAACAA AAAGGCAATT GATATGGCAA TAATGGTTGC AAAAATGTTG GGCTGTGAAA TGGTTATTGA CAAAGATATC TATTTCCAGA GGAAACACTA TAACTATCCT GATTTACCAA GCGGGTATCA AAAAACATCT GTTCCAATTG GGGAACACGG TACGTTTTTA GGTGTTGGAA TTACAGAAGT TCACCTCGAA GAAGATCCTG GACAGTACAA GCCTGATCTT GGAACAGTGG ACTACAACAG GAGCGGAACT CCGTTAATTG AGATTGTAAC AGATCCAGAC ATGAAAAGCC CTGAAGAAGC GAGAGAATTT TTAAGGCAGT TACTGAGATT ATTTAGATAT ATCGGCAACC TAAGGGGCGA AGGTACAATG AGGGCCGATA CGAACATATC CATTAAATAT AACGGAATTC AAGGAAACAG GGTTGAAGTT AAAAACGTAA ATTCCATAAG GGGAGTTTAC AAAGTTTTAA AATACGAATT AATCAGACAG AAAAACGTTC TCAGAAGAGG CGGAGAAATT AAACTCGAAA CAAGAGCTTT CATGGAAAGC CAAATGATTA CAAAAGGAAT GAGAAGTAAA GAAACTGCGG ACGATTACCG GTACATTCCA GACCCCGATT TACAGCCTAT TGTATTAAGT AACGACTGGG TTGAAAAAGT AGAGGCTCAG ATGCCAGAAA CTCCAATGAA CAAGGAAAAA AGGTTTGTTG AACAGTACGG AATAAAAGAA GACGATGCAA AAGTTTTAGT TTCAGATTTG GAACTTGCAG ATGTCTTTGA AAAAGTTGTA GCTGAACTTG GAAACGACAA AGACGGAATT TCGCTTGCAG TTACATGGAT TAGAAATGAG TTGAAGAGAG TTTTAGTTTA TAACAAAATA GAATTCTTCG AAACAAATTT AAAACCAGAA CACATGGTTG AATTGATTAA TTCAATTAAA GACAAAACAA TCAGCCAGAA AATCGGTAAA ACAATTATCG AACAGATGGT TGAACACAAA GGAGAAAAAA CTCCAAAAGA ACTGATTTCA GAAATGGGTT TAACTGTTAT CGAAGACACA AGTGAACTCG AAAAAGCCTG TGAAGAAGCT ATTAAAAACA GTGAAAAAGC AATTGAAGAT TATAAATCTG GAAATCAGAG AGCATTAAAC TCAGTTGTAG GCCAAGTTAT GAAATTAACC CGTGGAAGGG CTGAACCTGG AACTGTTGTT GAAATACTTA AGAAAAAAAT TGATGGATAA
|
Protein sequence | MSEDLSMKCG LEIHVQVDTN SKLFCQCPTN YKDVEPNTNI CPVCIGHPGA KPMPPNKKAI DMAIMVAKML GCEMVIDKDI YFQRKHYNYP DLPSGYQKTS VPIGEHGTFL GVGITEVHLE EDPGQYKPDL GTVDYNRSGT PLIEIVTDPD MKSPEEAREF LRQLLRLFRY IGNLRGEGTM RADTNISIKY NGIQGNRVEV KNVNSIRGVY KVLKYELIRQ KNVLRRGGEI KLETRAFMES QMITKGMRSK ETADDYRYIP DPDLQPIVLS NDWVEKVEAQ MPETPMNKEK RFVEQYGIKE DDAKVLVSDL ELADVFEKVV AELGNDKDGI SLAVTWIRNE LKRVLVYNKI EFFETNLKPE HMVELINSIK DKTISQKIGK TIIEQMVEHK GEKTPKELIS EMGLTVIEDT SELEKACEEA IKNSEKAIED YKSGNQRALN SVVGQVMKLT RGRAEPGTVV EILKKKIDG
|
| |