Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0188 |
Symbol | |
ID | 5329540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 197816 |
End bp | 199324 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640792709 |
Product | hypothetical protein |
Protein accession | YP_001329409 |
Protein GI | 150402115 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5270] PUA domain (predicted RNA-binding domain) |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.882321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGACTA TTTTGGGAAA AATTCATTTA AAATGGTGTA AAAACTGCAA CATCCCCGTA CTAGATACCA AATGTGCAAT TTGCGATTCT GAAACGGTTG AAGTTAAGGT AACTCCTCCC GGGGATGCAA GACCTGCTTT CAAAGGAGAT TTGGATTTAA TAAACAAAAC CATAAAATCT CAGTTTGGAA TAGAAGAAAA TTTATTTAAA AATAAACTAG TGCTCGTAAA CAAGGCTCCA GGAATTGAAT ATTTTCAAGA AATTGTCGTT GATGGAATAA TCTTTGGAAT TTTAAATTTC AACGAGAAAA AACACGAATG GAAGATAATT CCAACGATTG AGGGTGCCAG AAGACTTATT ACTGCAGGCT GCAAGAAAAA ATTACTCGTA GTTAAGGAAG ATGTTCCCAA ATTTATTTTG AATAAAGGGG CATCTGTTTT AAGGCCAGGA GTTGCATTTG CATCAGAAGA CATCTGTATT GATGATGATG TTATTATATT AATAGAAAAA CCCGACTCGA GTATGGATTT TAATGAACTG GATGTTTTGG GTGTTGGAAG ATCCAGAATG AATTACGAAG AAATTGTAAA TTCTGAAAAG GGAATGGTTG CAAAGGTTAG AAAATCTGAA CTTCCAAAAA ATTCAGAGGT TTTGCATGAA ATTGGCGAAT TTGATGAAGC AATCGAAAAA ATGATCGAAG CAAACAAAAA CGCAATGCAA AAGGTTGAAA GTAATTCCAT TGGATTTATG AGAAATACGG TTGTAAAAAT TGGAAGACCA GTTTCTGTCG CATATTCTGG TGGAAAGGAT AGCCTTGCAG TACTTCTTTT AGCATTTGAA GCGTTTAAAA ATTCAGAAAA CCCTGTAGAA TTTGATGTAT TATTCAATGA CACAGGAATC GAATTTAACG AAACTTTAGA AAATATCGAA GAAATTTCTA AAATGTATAA TCTCGAAATT TTGAAAACGA ATTCAGGAGA ATTCTGGGAA AAATTAGAAG AATATGGGCC CCCTGGAAGA GATAATCGGT GGTGCAGTGA AGTATGTAAA GTATCTCCGC TTGGAATACT TATCGATGAA AAATATGAAA AAGGATGTTT TTCGTTTGTG GGCCTTAGAA AGTATGAATC CATAAATCGT TCAAAAAAAC CAAGAATATG GAATAGCCCA ACGATTAAAA AACAAATGTT ATCAGCACCA ATATTAAACT GGACTGCAAT GCACGTTTGG ATATATATTT TAAAACATAA AGCTCCGTAC AATGTATTGT ATGGGCAATG TTTTGATAGA GTTGGTTGTT TCATGTGTCC TGCAATGGAA ATTGGAGAAA TTGAATTAGT AAAAATGAGT TATCCAGAAC TCTGGGAAAA ATGGGAAGGA TTCTTGAAAA ACCACGCCCA AAAATGCGGT AAGGATGAAA GTTGGGTAAA AGGCGGTTGG AGATGGACTA ACAAAACAAG GTCAAACCAA AAACAAGACG AACAGATAAA TGAAAACTGG CTCGGATAG
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Protein sequence | MKTILGKIHL KWCKNCNIPV LDTKCAICDS ETVEVKVTPP GDARPAFKGD LDLINKTIKS QFGIEENLFK NKLVLVNKAP GIEYFQEIVV DGIIFGILNF NEKKHEWKII PTIEGARRLI TAGCKKKLLV VKEDVPKFIL NKGASVLRPG VAFASEDICI DDDVIILIEK PDSSMDFNEL DVLGVGRSRM NYEEIVNSEK GMVAKVRKSE LPKNSEVLHE IGEFDEAIEK MIEANKNAMQ KVESNSIGFM RNTVVKIGRP VSVAYSGGKD SLAVLLLAFE AFKNSENPVE FDVLFNDTGI EFNETLENIE EISKMYNLEI LKTNSGEFWE KLEEYGPPGR DNRWCSEVCK VSPLGILIDE KYEKGCFSFV GLRKYESINR SKKPRIWNSP TIKKQMLSAP ILNWTAMHVW IYILKHKAPY NVLYGQCFDR VGCFMCPAME IGEIELVKMS YPELWEKWEG FLKNHAQKCG KDESWVKGGW RWTNKTRSNQ KQDEQINENW LG
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