Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_0183 |
Symbol | aroE |
ID | 5329627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 194343 |
End bp | 195185 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640792704 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001329404 |
Protein GI | 150402110 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGACA CGAAAACAAA ATTACTCGGG CTTATCGGGC ATCCAGTAGA TCATTCATTT TCACCGATAA TGCACAATAC TGCAATTGAA GACCTTGGTA TTAATTACGT GTACCTTGCA TTTGATGTTT CAGAAGAAAA TCTAAAAAAT GTAGTATCTG GTGCAAAAGC ACTTCAAATT ACTGGTTTTA ACGTTACAAT CCCGCATAAA ATAAATATTA TGAAGTATTT AGACGAAATT GATGAAGATG CAAAAGCAAT TGGTGCAGTG AATACCGTAA AAATTGAAAA CGGGAAAGCT ATTGGATATA ACACTGACGG AATTGGTGCA AAGAGGACAC TTGAAGAAAA AGCTGGAATT TTGATTGATA AAAACATTTT AATTATAGGT TCAGGAGGTG CCTCAAGGGC CGTTTGTTTC GAACTTGCAA AGGATAATAA TTTGACAATC ATAAACAGAA ATATTGAAAA AGCAAAAATT CTTTCAGAAG AATTTTCCAA AAAACTAAAA AAACAAAAGC CAATAAATTA CGGGGATTTA GATCTCGATA TAAAAAATTT TGACATAATT CTAAACACAA CCCCTGTTGG AATGCATCCA AACACGAATG TAGATCCAGT AATTCCTTTG AAAAATATCA AAAAAGATGC TGTTGTAATG GATTTGATAT ACAATCCCAT TGAACCAGTA TTTTTAAAAG AAGCTATAAA ATATGGTGCT AAAACAATAA ACGGTCTTGG AATGCTTGTT TACCAAGGAG CAGTTTCATT TGAAATATGG ACTGGGATGA AACCCGATAT ATATGTTATG AAAAAAGCTA TTAACTCAAA AATTAGACTG TGA
|
Protein sequence | MMDTKTKLLG LIGHPVDHSF SPIMHNTAIE DLGINYVYLA FDVSEENLKN VVSGAKALQI TGFNVTIPHK INIMKYLDEI DEDAKAIGAV NTVKIENGKA IGYNTDGIGA KRTLEEKAGI LIDKNILIIG SGGASRAVCF ELAKDNNLTI INRNIEKAKI LSEEFSKKLK KQKPINYGDL DLDIKNFDII LNTTPVGMHP NTNVDPVIPL KNIKKDAVVM DLIYNPIEPV FLKEAIKYGA KTINGLGMLV YQGAVSFEIW TGMKPDIYVM KKAINSKIRL
|
| |